Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC074281.1-201ENST00000436419 2081 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 TROAP-206ENST00000547923 1652 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 OR52N2-201ENST00000317037 1035 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 RPS10-202ENST00000344700 650 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 RN7SKP134-201ENST00000363960 269 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 BORCS7-202ENST00000369883 838 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 U3.24-201ENST00000391177 215 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 MIR941-2-201ENST00000401322 72 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 MIR941-4-201ENST00000401376 72 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL137222.1-201ENST00000407765 1162 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC010998.1-201ENST00000414774 943 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 CYP3A43-206ENST00000417625 1255 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL671883.1-201ENST00000421191 306 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC013469.1-201ENST00000426985 403 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC079779.2-202ENST00000427831 392 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC012456.2-201ENST00000431500 561 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL008718.1-201ENST00000445867 487 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 GFOD1-AS1-201ENST00000446001 332 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 HNRNPA1P47-201ENST00000453073 931 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 C6orf52-204ENST00000460742 541 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC009078.1-201ENST00000474978 783 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 RPL29-206ENST00000481629 880 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL133368.1-201ENST00000486273 814 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 OR7E86P-201ENST00000505858 990 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC112240.1-201ENST00000511007 394 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 HNRNPA1P76-201ENST00000529475 848 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 CINP-203ENST00000541568 572 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC007795.1-201ENST00000585883 437 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC092127.2-201ENST00000602862 601 ntTSL 3 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 MIR941-5-201ENST00000621667 72 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC116348.4-201ENST00000624127 348 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC005785.2-201ENST00000624655 631 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC091953.1-201ENST00000624775 296 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 Z84468.1-202ENST00000630584 667 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 BISPR-209ENST00000635176 1041 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 MIR941-3-201ENST00000637366 72 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 ASTN2-204ENST00000358637 3411 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC084876.2-201ENST00000624844 1709 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 ACTN4P2-201ENST00000473049 1892 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AC008507.5-201ENST00000624591 1969 ntBASIC8.7□□□□□ -1.02
SNX18Q96RF0 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 PKMP5-201ENST00000454707 1601 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 MID1-211ENST00000610939 1839 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 PRG3-201ENST00000287143 869 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 SPACA7-202ENST00000375699 807 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 HBA1-202ENST00000397797 504 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 ANKRD30BL-202ENST00000409867 1251 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 RN7SKP7-201ENST00000410540 285 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC092474.1-201ENST00000416158 1167 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms