Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 MYC-209ENST00000641252 345 ntBASIC21.54■■□□□ 1.04
SCML2Q9UQR0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.54■■□□□ 1.04
SCML2Q9UQR0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 AL589743.5-201ENST00000616611 1050 ntBASIC21.53■■□□□ 1.04
SCML2Q9UQR0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.53■■□□□ 1.04
SCML2Q9UQR0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.52■■□□□ 1.04
SCML2Q9UQR0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 AC091874.3-201ENST00000512672 1195 ntBASIC21.52■■□□□ 1.04
SCML2Q9UQR0 KRT18P6-201ENST00000555540 1265 ntBASIC21.52■■□□□ 1.04
SCML2Q9UQR0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML2Q9UQR0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
SCML2Q9UQR0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCML2Q9UQR0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 AC097658.1-201ENST00000475555 843 ntBASIC21.51■■□□□ 1.03
SCML2Q9UQR0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML2Q9UQR0 AC026310.3-201ENST00000625186 2373 ntBASIC21.51■■□□□ 1.03
SCML2Q9UQR0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 AC087633.2-202ENST00000565166 1439 ntBASIC21.5■■□□□ 1.03
SCML2Q9UQR0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.5■■□□□ 1.03
SCML2Q9UQR0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.5■■□□□ 1.03
SCML2Q9UQR0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML2Q9UQR0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.49■■□□□ 1.03
SCML2Q9UQR0 AC083880.1-201ENST00000608266 535 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms