Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 EEF1DP3-203ENST00000566025 782 ntBASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 KRT87P-202ENST00000534226 1464 ntBASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 AC061975.6-201ENST00000579045 1553 ntBASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 AC053503.5-201ENST00000601508 636 ntBASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CTPS2Q9NRF8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.11■□□□□ 0.65
CTPS2Q9NRF8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CTPS2Q9NRF8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 AC097381.1-201ENST00000429019 1296 ntBASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTPS2Q9NRF8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTPS2Q9NRF8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms