Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 AC097658.1-201ENST00000475555 843 ntBASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 AC011484.1-201ENST00000377652 1995 ntBASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.44■■□□□ 1.02
CDK5RAP1Q96SZ6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDK5RAP1Q96SZ6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 AC091874.3-201ENST00000512672 1195 ntBASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 KRT18P6-201ENST00000555540 1265 ntBASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 AL049796.1-201ENST00000565336 1766 ntBASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDK5RAP1Q96SZ6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 AC087633.2-202ENST00000565166 1439 ntBASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 AL355472.2-201ENST00000422958 438 ntBASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 DUSP5P2-201ENST00000426873 1033 ntBASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 AC098934.4-201ENST00000564127 592 ntBASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 MYC-209ENST00000641252 345 ntBASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK5RAP1Q96SZ6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDK5RAP1Q96SZ6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms