Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
DDX11Q96FC9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.44■■□□□ 1.5
DDX11Q96FC9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX11Q96FC9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 SLC7A5P2-201ENST00000553010 536 ntBASIC24.43■■□□□ 1.5
DDX11Q96FC9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
DDX11Q96FC9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX11Q96FC9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.42■■□□□ 1.5
DDX11Q96FC9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 ABHD17AP1-201ENST00000358206 933 ntBASIC24.42■■□□□ 1.5
DDX11Q96FC9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX11Q96FC9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX11Q96FC9 EEF1DP3-203ENST00000566025 782 ntBASIC24.42■■□□□ 1.5
DDX11Q96FC9 AL157384.1-201ENST00000445995 2473 ntBASIC24.42■■□□□ 1.5
DDX11Q96FC9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX11Q96FC9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 CNN2P6-201ENST00000439038 900 ntBASIC24.41■■□□□ 1.5
DDX11Q96FC9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 CD99P1-205ENST00000527459 561 ntBASIC24.41■■□□□ 1.5
DDX11Q96FC9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
DDX11Q96FC9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX11Q96FC9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX11Q96FC9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX11Q96FC9 GUSBP6-202ENST00000438529 1198 ntBASIC24.4■■□□□ 1.5
DDX11Q96FC9 AF201337.1-201ENST00000520239 748 ntBASIC24.4■■□□□ 1.5
DDX11Q96FC9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX11Q96FC9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX11Q96FC9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.4■■□□□ 1.5
DDX11Q96FC9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX11Q96FC9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.39■■□□□ 1.5
DDX11Q96FC9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX11Q96FC9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX11Q96FC9 AC061975.6-201ENST00000579045 1553 ntBASIC24.39■■□□□ 1.5
DDX11Q96FC9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.39■■□□□ 1.49
DDX11Q96FC9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
DDX11Q96FC9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.39■■□□□ 1.49
DDX11Q96FC9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
DDX11Q96FC9 AC053503.5-201ENST00000601508 636 ntBASIC24.39■■□□□ 1.49
DDX11Q96FC9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX11Q96FC9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DDX11Q96FC9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DDX11Q96FC9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 AL138781.1-201ENST00000566567 1274 ntBASIC24.38■■□□□ 1.49
DDX11Q96FC9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX11Q96FC9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.38■■□□□ 1.49
DDX11Q96FC9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms