Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SETD9Q8NE22 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.9■□□□□ 0.62
SETD9Q8NE22 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.9■□□□□ 0.62
SETD9Q8NE22 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.9■□□□□ 0.62
SETD9Q8NE22 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SETD9Q8NE22 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 AC116562.4-201ENST00000641316 2276 ntBASIC18.9■□□□□ 0.62
SETD9Q8NE22 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 TCF3P1-201ENST00000423021 1937 ntBASIC18.9■□□□□ 0.62
SETD9Q8NE22 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SETD9Q8NE22 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SETD9Q8NE22 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SETD9Q8NE22 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SETD9Q8NE22 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
SETD9Q8NE22 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SETD9Q8NE22 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SETD9Q8NE22 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SETD9Q8NE22 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.87■□□□□ 0.61
SETD9Q8NE22 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SETD9Q8NE22 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SETD9Q8NE22 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SETD9Q8NE22 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SETD9Q8NE22 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms