Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNEP1R1Q8N9A8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 MCRIP2P1-201ENST00000394346 511 ntBASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 AC091874.3-201ENST00000512672 1195 ntBASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 CYP2T3P-201ENST00000601990 817 ntBASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNEP1R1Q8N9A8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 KRT17P1-201ENST00000399211 1546 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 AC244015.2-201ENST00000616358 1861 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 FAM201B-201ENST00000458407 597 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 MIR4651-201ENST00000582622 73 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 AC100791.3-201ENST00000617619 330 ntBASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNEP1R1Q8N9A8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 AL589743.5-201ENST00000616611 1050 ntBASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNEP1R1Q8N9A8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms