Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 SOX15-203ENST00000570788 1093 ntBASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPOQ8N3V7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SYNPOQ8N3V7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 Z99916.2-201ENST00000604037 246 ntBASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SYNPOQ8N3V7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 AC127496.7-201ENST00000625110 1798 ntBASIC21■□□□□ 0.95
SYNPOQ8N3V7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 POM121L13P-201ENST00000422362 380 ntBASIC21■□□□□ 0.95
SYNPOQ8N3V7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPOQ8N3V7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SYNPOQ8N3V7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 CYP21A1P-202ENST00000354927 1481 ntBASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 C11orf96-202ENST00000528572 1834 ntBASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPOQ8N3V7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 AC105020.6-201ENST00000621523 1217 ntBASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPOQ8N3V7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms