Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.58■□□□□ 0.89
LDB1Q86U70 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LDB1Q86U70 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB1Q86U70 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB1Q86U70 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB1Q86U70 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.58■□□□□ 0.88
LDB1Q86U70 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.58■□□□□ 0.88
LDB1Q86U70 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.58■□□□□ 0.88
LDB1Q86U70 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB1Q86U70 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB1Q86U70 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB1Q86U70 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
LDB1Q86U70 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB1Q86U70 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.57■□□□□ 0.88
LDB1Q86U70 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB1Q86U70 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.57■□□□□ 0.88
LDB1Q86U70 FP700111.2-201ENST00000619190 1892 ntBASIC20.57■□□□□ 0.88
LDB1Q86U70 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
LDB1Q86U70 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB1Q86U70 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 AC073314.1-201ENST00000568729 2216 ntBASIC20.56■□□□□ 0.88
LDB1Q86U70 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.56■□□□□ 0.88
LDB1Q86U70 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LDB1Q86U70 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.56■□□□□ 0.88
LDB1Q86U70 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.56■□□□□ 0.88
LDB1Q86U70 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
LDB1Q86U70 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.56■□□□□ 0.88
LDB1Q86U70 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LDB1Q86U70 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB1Q86U70 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.56■□□□□ 0.88
LDB1Q86U70 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDB1Q86U70 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.55■□□□□ 0.88
LDB1Q86U70 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 AC007225.1-201ENST00000566331 1836 ntBASIC20.55■□□□□ 0.88
LDB1Q86U70 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.55■□□□□ 0.88
LDB1Q86U70 RBM17P2-201ENST00000616397 1405 ntBASIC20.55■□□□□ 0.88
LDB1Q86U70 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LDB1Q86U70 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.55■□□□□ 0.88
LDB1Q86U70 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.55■□□□□ 0.88
LDB1Q86U70 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LDB1Q86U70 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.55■□□□□ 0.88
LDB1Q86U70 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LDB1Q86U70 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.55■□□□□ 0.88
LDB1Q86U70 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB1Q86U70 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
LDB1Q86U70 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.54■□□□□ 0.88
LDB1Q86U70 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.54■□□□□ 0.88
LDB1Q86U70 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
LDB1Q86U70 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.54■□□□□ 0.88
LDB1Q86U70 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.54■□□□□ 0.88
LDB1Q86U70 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.54■□□□□ 0.88
LDB1Q86U70 MYCNOS-205ENST00000641950 531 ntBASIC20.54■□□□□ 0.88
LDB1Q86U70 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.54■□□□□ 0.88
LDB1Q86U70 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB1Q86U70 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.54■□□□□ 0.88
LDB1Q86U70 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.53■□□□□ 0.88
LDB1Q86U70 AC073130.3-201ENST00000624389 2278 ntBASIC20.53■□□□□ 0.88
LDB1Q86U70 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LDB1Q86U70 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LDB1Q86U70 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.53■□□□□ 0.88
LDB1Q86U70 AL162430.1-201ENST00000480705 870 ntBASIC20.53■□□□□ 0.88
LDB1Q86U70 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.53■□□□□ 0.88
LDB1Q86U70 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.53■□□□□ 0.88
LDB1Q86U70 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.53■□□□□ 0.88
LDB1Q86U70 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms