Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 AP005212.1-201ENST00000581547 1997 ntBASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 NTF6G-201ENST00000591094 616 ntBASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF549Q6P9A3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 KRT19P1-201ENST00000405746 1186 ntBASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 AC034268.1-201ENST00000441047 882 ntBASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 AC019069.1-201ENST00000610008 1333 ntBASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF549Q6P9A3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 AC027702.1-201ENST00000563810 1770 ntBASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 RBM17P2-201ENST00000616397 1405 ntBASIC20.44■□□□□ 0.86
ZNF549Q6P9A3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 FP700111.2-201ENST00000619190 1892 ntBASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 AC026271.2-201ENST00000428091 497 ntBASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF549Q6P9A3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 UBE2DNL-204ENST00000602536 740 ntBASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF549Q6P9A3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms