Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 AC105020.6-201ENST00000621523 1217 ntBASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHROOM1Q2M3G4 AC092368.3-202ENST00000574180 1591 ntBASIC24.2■■□□□ 1.47
SHROOM1Q2M3G4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SHROOM1Q2M3G4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
SHROOM1Q2M3G4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 AL596275.1-201ENST00000423464 877 ntBASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHROOM1Q2M3G4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 UNC93B4-201ENST00000505679 747 ntBASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHROOM1Q2M3G4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 SOX15-203ENST00000570788 1093 ntBASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.17■■□□□ 1.46
SHROOM1Q2M3G4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.16■■□□□ 1.46
SHROOM1Q2M3G4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHROOM1Q2M3G4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHROOM1Q2M3G4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.15■■□□□ 1.46
SHROOM1Q2M3G4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms