Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CACNA1EQ15878 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.23■□□□□ 0.83
CACNA1EQ15878 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1EQ15878 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1EQ15878 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CACNA1EQ15878 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.23■□□□□ 0.83
CACNA1EQ15878 RPS2P55-201ENST00000397318 883 ntBASIC20.22■□□□□ 0.83
CACNA1EQ15878 AC107956.1-201ENST00000494359 873 ntBASIC20.22■□□□□ 0.83
CACNA1EQ15878 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 AC116050.2-201ENST00000612102 1779 ntBASIC20.22■□□□□ 0.83
CACNA1EQ15878 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 C1orf229-201ENST00000623686 2258 ntBASIC20.22■□□□□ 0.83
CACNA1EQ15878 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.22■□□□□ 0.83
CACNA1EQ15878 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CACNA1EQ15878 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 RCN1P1-201ENST00000400413 996 ntBASIC20.21■□□□□ 0.83
CACNA1EQ15878 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 AC120498.8-201ENST00000614275 531 ntBASIC20.21■□□□□ 0.83
CACNA1EQ15878 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.21■□□□□ 0.83
CACNA1EQ15878 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CACNA1EQ15878 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 AC133561.5-201ENST00000635547 218 ntBASIC20.2■□□□□ 0.82
CACNA1EQ15878 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 RARRES2P10-201ENST00000564312 460 ntBASIC20.2■□□□□ 0.82
CACNA1EQ15878 RN7SL850P-201ENST00000579959 291 ntBASIC20.2■□□□□ 0.82
CACNA1EQ15878 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNA1EQ15878 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNA1EQ15878 CYP21A1P-202ENST00000354927 1481 ntBASIC20.19■□□□□ 0.82
CACNA1EQ15878 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1EQ15878 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1EQ15878 TSPY15P-201ENST00000457163 923 ntBASIC20.19■□□□□ 0.82
CACNA1EQ15878 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNA1EQ15878 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CACNA1EQ15878 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CACNA1EQ15878 TSPY7P-201ENST00000431358 1114 ntBASIC20.19■□□□□ 0.82
CACNA1EQ15878 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNA1EQ15878 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms