Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN6P56747 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLDN6P56747 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN6P56747 AL023875.1-201ENST00000640777 796 ntBASIC19.85■□□□□ 0.77
CLDN6P56747 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLDN6P56747 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 CYP21A1P-202ENST00000354927 1481 ntBASIC19.85■□□□□ 0.77
CLDN6P56747 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN6P56747 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLDN6P56747 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN6P56747 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN6P56747 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN6P56747 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN6P56747 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN6P56747 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN6P56747 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN6P56747 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN6P56747 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLDN6P56747 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN6P56747 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN6P56747 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN6P56747 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN6P56747 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLDN6P56747 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
CLDN6P56747 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLDN6P56747 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLDN6P56747 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CLDN6P56747 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.83■□□□□ 0.76
CLDN6P56747 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN6P56747 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLDN6P56747 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN6P56747 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 RPS2P55-201ENST00000397318 883 ntBASIC19.82■□□□□ 0.76
CLDN6P56747 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN6P56747 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.82■□□□□ 0.76
CLDN6P56747 AC107956.1-201ENST00000494359 873 ntBASIC19.82■□□□□ 0.76
CLDN6P56747 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN6P56747 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN6P56747 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CLDN6P56747 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN6P56747 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN6P56747 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN6P56747 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN6P56747 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN6P56747 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN6P56747 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN6P56747 AC233702.5-201ENST00000584107 538 ntBASIC19.81■□□□□ 0.76
CLDN6P56747 AC133561.5-201ENST00000635547 218 ntBASIC19.81■□□□□ 0.76
CLDN6P56747 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms