Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 SUP53tL(CAA)C 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)DtL(CAA)D 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)G1tL(CAA)G1 82 nt3.63□□□□□ -1.83
SPT20P50875 SUP54tL(CAA)G2 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)G3tL(CAA)G3 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)KtL(CAA)K 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)LtL(CAA)L 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)MtL(CAA)M 82 nt3.63□□□□□ -1.83
SPT20P50875 tL(CAA)NtL(CAA)N 82 nt3.63□□□□□ -1.83
SPT20P50875 IGO2YHR132W-A 396 nt3.63□□□□□ -1.83
SPT20P50875 SGN1YIR001C 753 nt3.63□□□□□ -1.83
SPT20P50875 PAM16YJL104W 450 nt3.63□□□□□ -1.83
SPT20P50875 RPL15AYLR029C 615 nt3.63□□□□□ -1.83
SPT20P50875 YLR302CYLR302C 363 nt3.63□□□□□ -1.83
SPT20P50875 RPS7BYNL096C 573 nt3.63□□□□□ -1.83
SPT20P50875 YNL205CYNL205C 423 nt3.63□□□□□ -1.83
SPT20P50875 YGL140CYGL140C 3660 nt3.63□□□□□ -1.83
SPT20P50875 VAC14YLR386W 2643 nt3.63□□□□□ -1.83
SPT20P50875 CHD1YER164W 4407 nt3.63□□□□□ -1.83
SPT20P50875 SWH1YAR042W 3567 nt3.63□□□□□ -1.83
SPT20P50875 USA1YML029W 2517 nt3.63□□□□□ -1.83
SPT20P50875 SNF12YNR023W 1701 nt3.62□□□□□ -1.83
SPT20P50875 RPS29BYDL061C 171 nt3.62□□□□□ -1.83
SPT20P50875 ATP17YDR377W 306 nt3.62□□□□□ -1.83
SPT20P50875 PRE8YML092C 753 nt3.62□□□□□ -1.83
SPT20P50875 ASC1YMR116C 960 nt3.62□□□□□ -1.83
SPT20P50875 HSP10YOR020C 321 nt3.62□□□□□ -1.83
SPT20P50875 MNR2YKL064W 2910 nt3.62□□□□□ -1.83
SPT20P50875 GPI10YGL142C 1851 nt3.62□□□□□ -1.83
SPT20P50875 YJR030CYJR030C 2238 nt3.62□□□□□ -1.83
SPT20P50875 MAL33YBR297W 1407 nt3.61□□□□□ -1.83
SPT20P50875 PIN4YBL051C 2007 nt3.61□□□□□ -1.83
SPT20P50875 AIP1YMR092C 1848 nt3.61□□□□□ -1.83
SPT20P50875 RRT13YER066W 558 nt3.61□□□□□ -1.83
SPT20P50875 YFR056CYFR056C 369 nt3.61□□□□□ -1.83
SPT20P50875 OST6YML019W 999 nt3.61□□□□□ -1.83
SPT20P50875 YPL229WYPL229W 621 nt3.61□□□□□ -1.83
SPT20P50875 YPR003CYPR003C 2265 nt3.61□□□□□ -1.83
SPT20P50875 PUB1YNL016W 1362 nt3.61□□□□□ -1.83
SPT20P50875 REB1YBR049C 2433 nt3.61□□□□□ -1.83
SPT20P50875 IRC3YDR332W 2070 nt3.6□□□□□ -1.83
SPT20P50875 YER066C-AYER066C-A 501 nt3.6□□□□□ -1.83
SPT20P50875 CDC26YFR036W 375 nt3.6□□□□□ -1.83
SPT20P50875 YLR458WYLR458W 381 nt3.6□□□□□ -1.83
SPT20P50875 YBL073WYBL073W 312 nt3.6□□□□□ -1.83
SPT20P50875 TDA1YMR291W 1761 nt3.6□□□□□ -1.83
SPT20P50875 IOC2YLR095C 2439 nt3.6□□□□□ -1.83
SPT20P50875 DAP2YHR028C 2457 nt3.59□□□□□ -1.83
SPT20P50875 YCR081C-AYCR081C-A 237 nt3.59□□□□□ -1.83
SPT20P50875 WIP1YDR374W-A 270 nt3.59□□□□□ -1.83
SPT20P50875 REC104YHR157W 549 nt3.59□□□□□ -1.83
SPT20P50875 YIR040CYIR040C 333 nt3.59□□□□□ -1.83
SPT20P50875 YNL170WYNL170W 396 nt3.59□□□□□ -1.83
SPT20P50875 YOL085W-AYOL085W-A 213 nt3.59□□□□□ -1.83
SPT20P50875 IRC23YOR044W 474 nt3.59□□□□□ -1.83
SPT20P50875 SLM6YBR266C 453 nt3.59□□□□□ -1.83
SPT20P50875 KIP3YGL216W 2418 nt3.59□□□□□ -1.84
SPT20P50875 GAC1YOR178C 2382 nt3.58□□□□□ -1.84
SPT20P50875 YEL018C-AYEL018C-A 534 nt3.58□□□□□ -1.84
SPT20P50875 YEL075CYEL075C 369 nt3.58□□□□□ -1.84
SPT20P50875 YIL066W-AYIL066W-A 444 nt3.58□□□□□ -1.84
SPT20P50875 PFY1YOR122C 381 nt3.58□□□□□ -1.84
SPT20P50875 YPL039WYPL039W 951 nt3.58□□□□□ -1.84
SPT20P50875 YPL080CYPL080C 327 nt3.58□□□□□ -1.84
SPT20P50875 YBR085C-AYBR085C-A 258 nt3.58□□□□□ -1.84
SPT20P50875 NTC20YBR188C 423 nt3.58□□□□□ -1.84
SPT20P50875 POL1YNL102W 4407 nt3.58□□□□□ -1.84
SPT20P50875 ICR1ICR1 3199 nt3.58□□□□□ -1.84
SPT20P50875 KRI1YNL308C 1776 nt3.58□□□□□ -1.84
SPT20P50875 BEM4YPL161C 1902 nt3.58□□□□□ -1.84
SPT20P50875 MIP6YHR015W 1980 nt3.58□□□□□ -1.84
SPT20P50875 YRM1YOR172W 2361 nt3.58□□□□□ -1.84
SPT20P50875 YER091C-AYER091C-A 222 nt3.57□□□□□ -1.84
SPT20P50875 RPL30YGL030W 318 nt3.57□□□□□ -1.84
SPT20P50875 NOP19YGR251W 591 nt3.57□□□□□ -1.84
SPT20P50875 ELM1YKL048C 1923 nt3.57□□□□□ -1.84
SPT20P50875 LOS1YKL205W 3303 nt3.57□□□□□ -1.84
SPT20P50875 NAT1YDL040C 2565 nt3.56□□□□□ -1.84
SPT20P50875 IES6YEL044W 501 nt3.56□□□□□ -1.84
SPT20P50875 ABF2YMR072W 552 nt3.56□□□□□ -1.84
SPT20P50875 LTP1YPR073C 486 nt3.56□□□□□ -1.84
SPT20P50875 LCB4YOR171C 1875 nt3.56□□□□□ -1.84
SPT20P50875 XRS2YDR369C 2565 nt3.56□□□□□ -1.84
SPT20P50875 ARP7YPR034W 1434 nt3.55□□□□□ -1.84
SPT20P50875 MTC4YBR255W 2085 nt3.55□□□□□ -1.84
SPT20P50875 YGL041CYGL041C 204 nt3.55□□□□□ -1.84
SPT20P50875 RPS0AYGR214W 759 nt3.55□□□□□ -1.84
SPT20P50875 PAU14YIL176C 363 nt3.55□□□□□ -1.84
SPT20P50875 PAU1YJL223C 363 nt3.55□□□□□ -1.84
SPT20P50875 snR42snR42 351 nt3.55□□□□□ -1.84
SPT20P50875 YKL100CYKL100C 1764 nt3.55□□□□□ -1.84
SPT20P50875 TIF4631YGR162W 2859 nt3.55□□□□□ -1.84
SPT20P50875 SPT6YGR116W 4356 nt3.55□□□□□ -1.84
SPT20P50875 ISW2YOR304W 3363 nt3.54□□□□□ -1.84
SPT20P50875 UTP25YIL091C 2166 nt3.54□□□□□ -1.84
SPT20P50875 YDR344CYDR344C 444 nt3.54□□□□□ -1.84
SPT20P50875 ERG28YER044C 447 nt3.54□□□□□ -1.84
SPT20P50875 RPS21BYJL136C 264 nt3.54□□□□□ -1.84
SPT20P50875 RPA34YJL148W 702 nt3.54□□□□□ -1.84
SPT20P50875 LSM2YBL026W 288 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms