Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RXRGP48443 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RXRGP48443 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RXRGP48443 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.59■□□□□ 0.89
RXRGP48443 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.59■□□□□ 0.89
RXRGP48443 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.59■□□□□ 0.89
RXRGP48443 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RXRGP48443 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RXRGP48443 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
RXRGP48443 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RXRGP48443 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RXRGP48443 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RXRGP48443 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RXRGP48443 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RXRGP48443 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRGP48443 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.58■□□□□ 0.89
RXRGP48443 AC093827.2-201ENST00000512654 315 ntBASIC20.58■□□□□ 0.89
RXRGP48443 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.58■□□□□ 0.89
RXRGP48443 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.58■□□□□ 0.89
RXRGP48443 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.58■□□□□ 0.89
RXRGP48443 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.58■□□□□ 0.89
RXRGP48443 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.58■□□□□ 0.88
RXRGP48443 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.58■□□□□ 0.88
RXRGP48443 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.58■□□□□ 0.88
RXRGP48443 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.58■□□□□ 0.88
RXRGP48443 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RXRGP48443 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
RXRGP48443 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RXRGP48443 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRGP48443 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRGP48443 AC003102.1-202ENST00000563394 1796 ntBASIC20.57■□□□□ 0.88
RXRGP48443 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRGP48443 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRGP48443 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RXRGP48443 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRGP48443 DUSP5P2-201ENST00000426873 1033 ntBASIC20.57■□□□□ 0.88
RXRGP48443 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RXRGP48443 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRGP48443 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRGP48443 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRGP48443 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.57■□□□□ 0.88
RXRGP48443 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRGP48443 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RXRGP48443 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.56■□□□□ 0.88
RXRGP48443 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 ESRRAP1-201ENST00000400596 1257 ntBASIC20.56■□□□□ 0.88
RXRGP48443 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRGP48443 AL391422.3-201ENST00000603791 2761 ntBASIC20.56■□□□□ 0.88
RXRGP48443 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RXRGP48443 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RXRGP48443 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RXRGP48443 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.55■□□□□ 0.88
RXRGP48443 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.55■□□□□ 0.88
RXRGP48443 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.55■□□□□ 0.88
RXRGP48443 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.55■□□□□ 0.88
RXRGP48443 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.55■□□□□ 0.88
RXRGP48443 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RXRGP48443 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRGP48443 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
RXRGP48443 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.54■□□□□ 0.88
RXRGP48443 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RXRGP48443 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RXRGP48443 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.54■□□□□ 0.88
RXRGP48443 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.54■□□□□ 0.88
RXRGP48443 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.54■□□□□ 0.88
RXRGP48443 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms