Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 FPR1YNL135C 345 nt2.82□□□□□ -1.96
UPF3P48412 ATG13YPR185W 2217 nt2.82□□□□□ -1.96
UPF3P48412 SNF12YNR023W 1701 nt2.82□□□□□ -1.96
UPF3P48412 YOR331CYOR331C 558 nt2.81□□□□□ -1.96
UPF3P48412 YPL034WYPL034W 498 nt2.81□□□□□ -1.96
UPF3P48412 UBP16YPL072W 1500 nt2.81□□□□□ -1.96
UPF3P48412 RAX2YLR084C 3663 nt2.81□□□□□ -1.96
UPF3P48412 TFC4YGR047C 3078 nt2.8□□□□□ -1.96
UPF3P48412 BNA4YBL098W 1383 nt2.8□□□□□ -1.96
UPF3P48412 YDL187CYDL187C 330 nt2.8□□□□□ -1.96
UPF3P48412 GPI19YDR437W 423 nt2.8□□□□□ -1.96
UPF3P48412 COG2YGR120C 789 nt2.8□□□□□ -1.96
UPF3P48412 YNL179CYNL179C 438 nt2.8□□□□□ -1.96
UPF3P48412 YOL019W-AYOL019W-A 153 nt2.8□□□□□ -1.96
UPF3P48412 YOR385WYOR385W 873 nt2.8□□□□□ -1.96
UPF3P48412 NSL1YPL233W 651 nt2.8□□□□□ -1.96
UPF3P48412 NPR3YHL023C 3441 nt2.8□□□□□ -1.96
UPF3P48412 CYR1YJL005W 6081 nt2.79□□□□□ -1.96
UPF3P48412 SSF1YHR066W 1362 nt2.79□□□□□ -1.96
UPF3P48412 YDR029WYDR029W 315 nt2.79□□□□□ -1.96
UPF3P48412 GLC7YER133W 939 nt2.79□□□□□ -1.96
UPF3P48412 YIL029CYIL029C 429 nt2.79□□□□□ -1.96
UPF3P48412 YLR012CYLR012C 300 nt2.79□□□□□ -1.96
UPF3P48412 HHT2YNL031C 411 nt2.79□□□□□ -1.96
UPF3P48412 YIL169CYIL169C 2988 nt2.79□□□□□ -1.96
UPF3P48412 ILS1YBL076C 3219 nt2.78□□□□□ -1.96
UPF3P48412 TLC1TLC1 1301 nt2.78□□□□□ -1.96
UPF3P48412 YCR081C-AYCR081C-A 237 nt2.78□□□□□ -1.96
UPF3P48412 snR84snR84 550 nt2.78□□□□□ -1.96
UPF3P48412 RRT13YER066W 558 nt2.78□□□□□ -1.96
UPF3P48412 YER175W-AYER175W-A 165 nt2.78□□□□□ -1.96
UPF3P48412 OTU2YHL013C 924 nt2.78□□□□□ -1.96
UPF3P48412 YHR086W-AYHR086W-A 162 nt2.78□□□□□ -1.96
UPF3P48412 YAP5YIR018W 738 nt2.78□□□□□ -1.96
UPF3P48412 RGM1YMR182C 636 nt2.78□□□□□ -1.96
UPF3P48412 YBR071WYBR071W 636 nt2.78□□□□□ -1.96
UPF3P48412 FLO11YIR019C 4104 nt2.78□□□□□ -1.97
UPF3P48412 BI4Q0120 1917 nt2.78□□□□□ -1.97
UPF3P48412 ECM5YMR176W 4236 nt2.77□□□□□ -1.97
UPF3P48412 RPL23BYER117W 414 nt2.77□□□□□ -1.97
UPF3P48412 RNP1YLL046C 750 nt2.77□□□□□ -1.97
UPF3P48412 PAU23YLR037C 375 nt2.77□□□□□ -1.97
UPF3P48412 YLR302CYLR302C 363 nt2.77□□□□□ -1.97
UPF3P48412 SMA2YML066C 1110 nt2.77□□□□□ -1.97
UPF3P48412 YPR050CYPR050C 414 nt2.77□□□□□ -1.97
UPF3P48412 YME2YMR302C 2553 nt2.77□□□□□ -1.97
UPF3P48412 RLI1YDR091C 1827 nt2.77□□□□□ -1.97
UPF3P48412 YIL082W-AYIL082W-A 4497 nt2.76□□□□□ -1.97
UPF3P48412 SSF2YDR312W 1362 nt2.76□□□□□ -1.97
UPF3P48412 KSP1YHR082C 3090 nt2.76□□□□□ -1.97
UPF3P48412 AMS1YGL156W 3252 nt2.76□□□□□ -1.97
UPF3P48412 YGL015CYGL015C 393 nt2.76□□□□□ -1.97
UPF3P48412 YGL042CYGL042C 306 nt2.76□□□□□ -1.97
UPF3P48412 RLP24YLR009W 600 nt2.76□□□□□ -1.97
UPF3P48412 YLR252WYLR252W 306 nt2.76□□□□□ -1.97
UPF3P48412 VAC8YEL013W 1737 nt2.76□□□□□ -1.97
UPF3P48412 INP52YNL106C 3552 nt2.76□□□□□ -1.97
UPF3P48412 GYP7YDL234C 2241 nt2.76□□□□□ -1.97
UPF3P48412 SDC25YLL016W 3147 nt2.75□□□□□ -1.97
UPF3P48412 PAM1YDR251W 2493 nt2.75□□□□□ -1.97
UPF3P48412 HNT1YDL125C 477 nt2.75□□□□□ -1.97
UPF3P48412 TSA2YDR453C 591 nt2.75□□□□□ -1.97
UPF3P48412 RPL29YFR032C-A 180 nt2.75□□□□□ -1.97
UPF3P48412 FYV4YHR059W 393 nt2.75□□□□□ -1.97
UPF3P48412 MPP6YNR024W 561 nt2.75□□□□□ -1.97
UPF3P48412 ARF3YOR094W 552 nt2.75□□□□□ -1.97
UPF3P48412 RBL2YOR265W 321 nt2.75□□□□□ -1.97
UPF3P48412 RPL33AYPL143W 324 nt2.75□□□□□ -1.97
UPF3P48412 YPR096CYPR096C 303 nt2.75□□□□□ -1.97
UPF3P48412 YPR145C-AYPR145C-A 237 nt2.75□□□□□ -1.97
UPF3P48412 ARR2YPR200C 393 nt2.75□□□□□ -1.97
UPF3P48412 YPR203WYPR203W 309 nt2.75□□□□□ -1.97
UPF3P48412 YGR067CYGR067C 2415 nt2.75□□□□□ -1.97
UPF3P48412 YJL070CYJL070C 2667 nt2.75□□□□□ -1.97
UPF3P48412 SMY2YBR172C 2223 nt2.74□□□□□ -1.97
UPF3P48412 POL3YDL102W 3294 nt2.74□□□□□ -1.97
UPF3P48412 SIN3YOL004W 4611 nt2.74□□□□□ -1.97
UPF3P48412 ESL1YIL151C 3357 nt2.74□□□□□ -1.97
UPF3P48412 SPR3YGR059W 1539 nt2.74□□□□□ -1.97
UPF3P48412 YPR089WYPR089W 2667 nt2.74□□□□□ -1.97
UPF3P48412 SKT5YBL061C 2091 nt2.74□□□□□ -1.97
UPF3P48412 HMF1YER057C 390 nt2.74□□□□□ -1.97
UPF3P48412 RAD6YGL058W 519 nt2.74□□□□□ -1.97
UPF3P48412 PRS3YHL011C 963 nt2.74□□□□□ -1.97
UPF3P48412 SPO13YHR014W 876 nt2.74□□□□□ -1.97
UPF3P48412 APQ13YJL075C 417 nt2.74□□□□□ -1.97
UPF3P48412 YKL033W-AYKL033W-A 711 nt2.74□□□□□ -1.97
UPF3P48412 AFB1YLR040C 675 nt2.74□□□□□ -1.97
UPF3P48412 RPS1AYLR441C 768 nt2.74□□□□□ -1.97
UPF3P48412 MRPL33YMR286W 261 nt2.74□□□□□ -1.97
UPF3P48412 YMR304C-AYMR304C-A 351 nt2.74□□□□□ -1.97
UPF3P48412 JSN1YJR091C 3276 nt2.73□□□□□ -1.97
UPF3P48412 YOR343W-AYOR343W-A 1317 nt2.73□□□□□ -1.97
UPF3P48412 KIN82YCR091W 2163 nt2.73□□□□□ -1.97
UPF3P48412 YNL034WYNL034W 1839 nt2.73□□□□□ -1.97
UPF3P48412 SNU114YKL173W 3027 nt2.73□□□□□ -1.97
UPF3P48412 SAP1YER047C 2694 nt2.73□□□□□ -1.97
UPF3P48412 YJR141WYJR141W 1044 nt2.73□□□□□ -1.97
UPF3P48412 CSI1YMR025W 888 nt2.73□□□□□ -1.97
UPF3P48412 YNR021WYNR021W 1215 nt2.73□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms