Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC3P40938 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC3P40938 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFC3P40938 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC3P40938 LSM12P1-201ENST00000411836 588 ntBASIC18.86■□□□□ 0.61
RFC3P40938 FAM201B-201ENST00000458407 597 ntBASIC18.86■□□□□ 0.61
RFC3P40938 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC3P40938 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC3P40938 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFC3P40938 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC3P40938 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC3P40938 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC3P40938 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC3P40938 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC3P40938 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFC3P40938 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.85■□□□□ 0.61
RFC3P40938 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC3P40938 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RFC3P40938 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 AC097658.1-201ENST00000475555 843 ntBASIC18.85■□□□□ 0.61
RFC3P40938 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC3P40938 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC3P40938 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 AC091874.3-201ENST00000512672 1195 ntBASIC18.84■□□□□ 0.61
RFC3P40938 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.84■□□□□ 0.61
RFC3P40938 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC3P40938 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.84■□□□□ 0.61
RFC3P40938 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RFC3P40938 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC3P40938 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC3P40938 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.83■□□□□ 0.61
RFC3P40938 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC3P40938 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC3P40938 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFC3P40938 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC3P40938 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFC3P40938 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.83■□□□□ 0.61
RFC3P40938 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC3P40938 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC3P40938 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RFC3P40938 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.83■□□□□ 0.6
RFC3P40938 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC3P40938 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC3P40938 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.83■□□□□ 0.6
RFC3P40938 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC3P40938 FAM21FP-204ENST00000608637 956 ntBASIC18.83■□□□□ 0.6
RFC3P40938 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC3P40938 FBXW4P1-201ENST00000426721 2239 ntBASIC18.83■□□□□ 0.6
RFC3P40938 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC3P40938 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC3P40938 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC3P40938 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 AC007322.3-201ENST00000426526 701 ntBASIC18.82■□□□□ 0.6
RFC3P40938 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 MYC-209ENST00000641252 345 ntBASIC18.82■□□□□ 0.6
RFC3P40938 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFC3P40938 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC3P40938 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RFC3P40938 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFC3P40938 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms