Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YPL276WYPL276W 438 nt2.67□□□□□ -1.98
LSM5P40089 YLR278CYLR278C 4026 nt2.67□□□□□ -1.98
LSM5P40089 PSD2YGR170W 3417 nt2.67□□□□□ -1.98
LSM5P40089 JSN1YJR091C 3276 nt2.66□□□□□ -1.98
LSM5P40089 NCS2YNL119W 1482 nt2.66□□□□□ -1.98
LSM5P40089 VPS64YDR200C 1815 nt2.66□□□□□ -1.98
LSM5P40089 CDC20YGL116W 1833 nt2.66□□□□□ -1.98
LSM5P40089 GPI19YDR437W 423 nt2.66□□□□□ -1.98
LSM5P40089 RRT13YER066W 558 nt2.66□□□□□ -1.98
LSM5P40089 GLC7YER133W 939 nt2.66□□□□□ -1.98
LSM5P40089 FAR7YFR008W 666 nt2.66□□□□□ -1.98
LSM5P40089 YGR121W-AYGR121W-A 216 nt2.66□□□□□ -1.98
LSM5P40089 RPL27AYHR010W 411 nt2.66□□□□□ -1.98
LSM5P40089 AIM19YIL087C 474 nt2.66□□□□□ -1.98
LSM5P40089 RNP1YLL046C 750 nt2.66□□□□□ -1.98
LSM5P40089 HOS4YIL112W 3252 nt2.66□□□□□ -1.98
LSM5P40089 GYP7YDL234C 2241 nt2.66□□□□□ -1.98
LSM5P40089 EDS1YBR033W 2760 nt2.66□□□□□ -1.98
LSM5P40089 YDR115WYDR115W 318 nt2.65□□□□□ -1.99
LSM5P40089 YHR054CYHR054C 1065 nt2.65□□□□□ -1.99
LSM5P40089 YKR033CYKR033C 426 nt2.65□□□□□ -1.99
LSM5P40089 YLR224WYLR224W 1110 nt2.65□□□□□ -1.99
LSM5P40089 RPS29AYLR388W 171 nt2.65□□□□□ -1.99
LSM5P40089 YNL046WYNL046W 519 nt2.65□□□□□ -1.99
LSM5P40089 YNL235CYNL235C 432 nt2.65□□□□□ -1.99
LSM5P40089 YOL029CYOL029C 606 nt2.65□□□□□ -1.99
LSM5P40089 ALG14YBR070C 714 nt2.65□□□□□ -1.99
LSM5P40089 YPR170CYPR170C 336 nt2.65□□□□□ -1.99
LSM5P40089 YHR078WYHR078W 1659 nt2.64□□□□□ -1.99
LSM5P40089 snR59snR59 78 nt2.64□□□□□ -1.99
LSM5P40089 YDR461C-AYDR461C-A 243 nt2.64□□□□□ -1.99
LSM5P40089 MPO1YGL010W 525 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)G1tW(CCA)G1 72 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)G2tW(CCA)G2 72 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)JtW(CCA)J 72 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)KtW(CCA)K 72 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)MtW(CCA)M 72 nt2.64□□□□□ -1.99
LSM5P40089 tW(CCA)PtW(CCA)P 72 nt2.64□□□□□ -1.99
LSM5P40089 YPR145C-AYPR145C-A 237 nt2.64□□□□□ -1.99
LSM5P40089 YGR067CYGR067C 2415 nt2.64□□□□□ -1.99
LSM5P40089 YKU80YMR106C 1890 nt2.64□□□□□ -1.99
LSM5P40089 REF2YDR195W 1602 nt2.64□□□□□ -1.99
LSM5P40089 KSP1YHR082C 3090 nt2.63□□□□□ -1.99
LSM5P40089 SHE4YOR035C 2370 nt2.63□□□□□ -1.99
LSM5P40089 snR70snR70 164 nt2.63□□□□□ -1.99
LSM5P40089 YDL158CYDL158C 309 nt2.63□□□□□ -1.99
LSM5P40089 YDL163WYDL163W 303 nt2.63□□□□□ -1.99
LSM5P40089 SNO3YFL060C 669 nt2.63□□□□□ -1.99
LSM5P40089 MST27YGL051W 705 nt2.63□□□□□ -1.99
LSM5P40089 YJL202CYJL202C 348 nt2.63□□□□□ -1.99
LSM5P40089 PRP21YJL203W 843 nt2.63□□□□□ -1.99
LSM5P40089 VPH2YKL119C 648 nt2.63□□□□□ -1.99
LSM5P40089 YMR144WYMR144W 1029 nt2.63□□□□□ -1.99
LSM5P40089 RPL36AYMR194W 303 nt2.63□□□□□ -1.99
LSM5P40089 SNO2YNL334C 669 nt2.63□□□□□ -1.99
LSM5P40089 CSM4YPL200W 471 nt2.63□□□□□ -1.99
LSM5P40089 FAR11YNL127W 2862 nt2.63□□□□□ -1.99
LSM5P40089 YNL018CYNL018C 1839 nt2.63□□□□□ -1.99
LSM5P40089 NUM1YDR150W 8247 nt2.63□□□□□ -1.99
LSM5P40089 SNF12YNR023W 1701 nt2.62□□□□□ -1.99
LSM5P40089 YPR089WYPR089W 2667 nt2.62□□□□□ -1.99
LSM5P40089 YPL150WYPL150W 2706 nt2.62□□□□□ -1.99
LSM5P40089 snR9snR9 187 nt2.62□□□□□ -1.99
LSM5P40089 VPS74YDR372C 1038 nt2.62□□□□□ -1.99
LSM5P40089 PNC1YGL037C 651 nt2.62□□□□□ -1.99
LSM5P40089 YGR050CYGR050C 357 nt2.62□□□□□ -1.99
LSM5P40089 YAL042C-AYAL042C-A 378 nt2.62□□□□□ -1.99
LSM5P40089 GDI1YER136W 1356 nt2.61□□□□□ -1.99
LSM5P40089 SNU114YKL173W 3027 nt2.61□□□□□ -1.99
LSM5P40089 YDR537CYDR537C 606 nt2.61□□□□□ -1.99
LSM5P40089 ACF4YJR083C 930 nt2.61□□□□□ -1.99
LSM5P40089 ATP18YML081C-A 180 nt2.61□□□□□ -1.99
LSM5P40089 NSL1YPL233W 651 nt2.61□□□□□ -1.99
LSM5P40089 YJL070CYJL070C 2667 nt2.61□□□□□ -1.99
LSM5P40089 SUL1YBR294W 2580 nt2.6□□□□□ -1.99
LSM5P40089 ISW1YBR245C 3390 nt2.6□□□□□ -1.99
LSM5P40089 YBL005W-BYBL005W-B 5268 nt2.6□□□□□ -1.99
LSM5P40089 YFL012W-AYFL012W-A 375 nt2.6□□□□□ -1.99
LSM5P40089 FYV4YHR059W 393 nt2.6□□□□□ -1.99
LSM5P40089 TAP42YMR028W 1101 nt2.6□□□□□ -1.99
LSM5P40089 YBR197CYBR197C 654 nt2.6□□□□□ -1.99
LSM5P40089 ORC2YBR060C 1863 nt2.6□□□□□ -1.99
LSM5P40089 AYT1YLL063C 1425 nt2.59□□□□□ -1.99
LSM5P40089 MRD1YPR112C 2664 nt2.59□□□□□ -1.99
LSM5P40089 FKS3YMR306W 5358 nt2.59□□□□□ -1.99
LSM5P40089 YDR042CYDR042C 603 nt2.59□□□□□ -1.99
LSM5P40089 YKL123WYKL123W 381 nt2.59□□□□□ -1.99
LSM5P40089 YMR254CYMR254C 309 nt2.59□□□□□ -1.99
LSM5P40089 YOR152CYOR152C 771 nt2.59□□□□□ -1.99
LSM5P40089 ECM5YMR176W 4236 nt2.59□□□□□ -1.99
LSM5P40089 PFF1YBR074W 2931 nt2.59□□□□□ -1.99
LSM5P40089 TAO3YIL129C 7131 nt2.59□□□□□ -2
LSM5P40089 HRD3YLR207W 2502 nt2.59□□□□□ -2
LSM5P40089 RRI2YOL117W 1938 nt2.58□□□□□ -2
LSM5P40089 YGR228WYGR228W 345 nt2.58□□□□□ -2
LSM5P40089 SGM1YJR134C 2124 nt2.58□□□□□ -2
LSM5P40089 PAU23YLR037C 375 nt2.58□□□□□ -2
LSM5P40089 ATG38YLR211C 681 nt2.58□□□□□ -2
LSM5P40089 HRI1YLR301W 735 nt2.58□□□□□ -2
LSM5P40089 YPL034WYPL034W 498 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms