Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 BFR1YOR198C 1413 nt3.57□□□□□ -1.84
MSH2P25847 DIA2YOR080W 2199 nt3.56□□□□□ -1.84
MSH2P25847 TOM70YNL121C 1854 nt3.56□□□□□ -1.84
MSH2P25847 JIP5YPR169W 1479 nt3.56□□□□□ -1.84
MSH2P25847 TCD1YHR003C 1290 nt3.56□□□□□ -1.84
MSH2P25847 YMR141CYMR141C 309 nt3.56□□□□□ -1.84
MSH2P25847 RPS8AYBL072C 603 nt3.56□□□□□ -1.84
MSH2P25847 snR191snR191 274 nt3.56□□□□□ -1.84
MSH2P25847 TRZ1YKR079C 2517 nt3.56□□□□□ -1.84
MSH2P25847 YPS5YGL259W 498 nt3.55□□□□□ -1.84
MSH2P25847 tV(CAC)DtV(CAC)D 73 nt3.55□□□□□ -1.84
MSH2P25847 tV(CAC)HtV(CAC)H 73 nt3.55□□□□□ -1.84
MSH2P25847 LSM2YBL026W 288 nt3.55□□□□□ -1.84
MSH2P25847 YPL039WYPL039W 951 nt3.55□□□□□ -1.84
MSH2P25847 BMS1YPL217C 3552 nt3.55□□□□□ -1.84
MSH2P25847 IOC3YFR013W 2364 nt3.54□□□□□ -1.84
MSH2P25847 FLO9YAL063C 3969 nt3.54□□□□□ -1.84
MSH2P25847 YDR269CYDR269C 324 nt3.54□□□□□ -1.84
MSH2P25847 YER135CYER135C 393 nt3.54□□□□□ -1.84
MSH2P25847 RAD6YGL058W 519 nt3.54□□□□□ -1.84
MSH2P25847 BET3YKR068C 582 nt3.54□□□□□ -1.84
MSH2P25847 PAU23YLR037C 375 nt3.54□□□□□ -1.84
MSH2P25847 CMC2YBL059C-A 330 nt3.54□□□□□ -1.84
MSH2P25847 YOR248WYOR248W 303 nt3.54□□□□□ -1.84
MSH2P25847 RPL20BYOR312C 519 nt3.54□□□□□ -1.84
MSH2P25847 EXO84YBR102C 2262 nt3.53□□□□□ -1.84
MSH2P25847 TIF35YDR429C 825 nt3.53□□□□□ -1.84
MSH2P25847 YER079WYER079W 633 nt3.53□□□□□ -1.84
MSH2P25847 YER107W-AYER107W-A 321 nt3.53□□□□□ -1.84
MSH2P25847 YOL159CYOL159C 516 nt3.53□□□□□ -1.84
MSH2P25847 MSS18YPR134W 807 nt3.53□□□□□ -1.84
MSH2P25847 VHR2YER064C 1518 nt3.53□□□□□ -1.84
MSH2P25847 ENA5YDR038C 3276 nt3.53□□□□□ -1.84
MSH2P25847 ENA2YDR039C 3276 nt3.53□□□□□ -1.84
MSH2P25847 ENA1YDR040C 3276 nt3.53□□□□□ -1.84
MSH2P25847 YKL100CYKL100C 1764 nt3.53□□□□□ -1.84
MSH2P25847 AKR1YDR264C 2295 nt3.53□□□□□ -1.85
MSH2P25847 ARO1YDR127W 4767 nt3.52□□□□□ -1.85
MSH2P25847 ERG28YER044C 447 nt3.52□□□□□ -1.85
MSH2P25847 NBL1YHR199C-A 222 nt3.52□□□□□ -1.85
MSH2P25847 YLR269CYLR269C 351 nt3.52□□□□□ -1.85
MSH2P25847 RAD33YML011C 534 nt3.52□□□□□ -1.85
MSH2P25847 YNL043CYNL043C 321 nt3.52□□□□□ -1.85
MSH2P25847 RFC3YNL290W 1023 nt3.52□□□□□ -1.85
MSH2P25847 YPR014CYPR014C 330 nt3.52□□□□□ -1.85
MSH2P25847 YPR108W-AYPR108W-A 213 nt3.52□□□□□ -1.85
MSH2P25847 YBR137WYBR137W 540 nt3.52□□□□□ -1.85
MSH2P25847 RIX1YHR197W 2292 nt3.52□□□□□ -1.85
MSH2P25847 SKP2YNL311C 2292 nt3.52□□□□□ -1.85
MSH2P25847 SNF12YNR023W 1701 nt3.52□□□□□ -1.85
MSH2P25847 YHR214C-CYHR214C-C 1437 nt3.52□□□□□ -1.85
MSH2P25847 VFA1YER128W 612 nt3.51□□□□□ -1.85
MSH2P25847 YLR154C-HYLR154C-H 132 nt3.51□□□□□ -1.85
MSH2P25847 YLR156C-AYLR156C-A 132 nt3.51□□□□□ -1.85
MSH2P25847 YLR157C-CYLR157C-C 132 nt3.51□□□□□ -1.85
MSH2P25847 YLR159C-AYLR159C-A 132 nt3.51□□□□□ -1.85
MSH2P25847 ISU1YPL135W 498 nt3.51□□□□□ -1.85
MSH2P25847 SNT1YCR033W 3681 nt3.51□□□□□ -1.85
MSH2P25847 PSK1YAL017W 4071 nt3.5□□□□□ -1.85
MSH2P25847 SIP3YNL257C 3690 nt3.5□□□□□ -1.85
MSH2P25847 BOI1YBL085W 2943 nt3.5□□□□□ -1.85
MSH2P25847 YER087C-AYER087C-A 552 nt3.5□□□□□ -1.85
MSH2P25847 YIR040CYIR040C 333 nt3.5□□□□□ -1.85
MSH2P25847 SHH3YMR118C 591 nt3.5□□□□□ -1.85
MSH2P25847 KIN82YCR091W 2163 nt3.5□□□□□ -1.85
MSH2P25847 GPI17YDR434W 1605 nt3.5□□□□□ -1.85
MSH2P25847 RPA135YPR010C 3612 nt3.49□□□□□ -1.85
MSH2P25847 SMC3YJL074C 3693 nt3.49□□□□□ -1.85
MSH2P25847 YAP6YDR259C 1152 nt3.49□□□□□ -1.85
MSH2P25847 RNR4YGR180C 1038 nt3.49□□□□□ -1.85
MSH2P25847 YHR138CYHR138C 345 nt3.49□□□□□ -1.85
MSH2P25847 YAL064W-BYAL064W-B 381 nt3.49□□□□□ -1.85
MSH2P25847 APC9YLR102C 798 nt3.49□□□□□ -1.85
MSH2P25847 YOR029WYOR029W 336 nt3.49□□□□□ -1.85
MSH2P25847 YOR293C-AYOR293C-A 150 nt3.49□□□□□ -1.85
MSH2P25847 YBR012W-AYBR012W-A 1323 nt3.48□□□□□ -1.85
MSH2P25847 YOR142W-AYOR142W-A 1323 nt3.48□□□□□ -1.85
MSH2P25847 YPR158W-AYPR158W-A 1323 nt3.48□□□□□ -1.85
MSH2P25847 FLO5YHR211W 3228 nt3.48□□□□□ -1.85
MSH2P25847 MED1YPR070W 1701 nt3.48□□□□□ -1.85
MSH2P25847 tF(GAA)DtF(GAA)D 73 nt3.48□□□□□ -1.85
MSH2P25847 tF(GAA)NtF(GAA)N 73 nt3.48□□□□□ -1.85
MSH2P25847 TIR2YOR010C 756 nt3.48□□□□□ -1.85
MSH2P25847 YPL197CYPL197C 414 nt3.48□□□□□ -1.85
MSH2P25847 STE23YLR389C 3084 nt3.47□□□□□ -1.85
MSH2P25847 NPR1YNL183C 2373 nt3.47□□□□□ -1.85
MSH2P25847 BCH1YMR237W 2175 nt3.47□□□□□ -1.85
MSH2P25847 MRH1YDR033W 963 nt3.47□□□□□ -1.85
MSH2P25847 RRT13YER066W 558 nt3.47□□□□□ -1.85
MSH2P25847 LAG1YHL003C 1236 nt3.47□□□□□ -1.85
MSH2P25847 RPL37AYLR185W 267 nt3.47□□□□□ -1.85
MSH2P25847 YBR032WYBR032W 303 nt3.47□□□□□ -1.85
MSH2P25847 CDH1YGL003C 1701 nt3.47□□□□□ -1.85
MSH2P25847 NUP60YAR002W 1620 nt3.46□□□□□ -1.86
MSH2P25847 FAP7YDL166C 594 nt3.46□□□□□ -1.86
MSH2P25847 TSA2YDR453C 591 nt3.46□□□□□ -1.86
MSH2P25847 IRC4YDR540C 540 nt3.46□□□□□ -1.86
MSH2P25847 YJR023CYJR023C 402 nt3.46□□□□□ -1.86
MSH2P25847 YAR047CYAR047C 321 nt3.46□□□□□ -1.86
MSH2P25847 RPS28BYLR264W 204 nt3.46□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 44.5 ms