Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 PAM1YDR251W 2493 nt3.58□□□□□ -1.84
HCA4P20448 HNT1YDL125C 477 nt3.58□□□□□ -1.84
HCA4P20448 GCN4YEL009C 846 nt3.58□□□□□ -1.84
HCA4P20448 RTT105YER104W 627 nt3.58□□□□□ -1.84
HCA4P20448 MAM33YIL070C 801 nt3.58□□□□□ -1.84
HCA4P20448 RIM9YMR063W 720 nt3.58□□□□□ -1.84
HCA4P20448 HHF2YNL030W 312 nt3.58□□□□□ -1.84
HCA4P20448 YOR073W-AYOR073W-A 234 nt3.58□□□□□ -1.84
HCA4P20448 SEA4YBL104C 3117 nt3.57□□□□□ -1.84
HCA4P20448 YMR317WYMR317W 3423 nt3.57□□□□□ -1.84
HCA4P20448 SNA4YDL123W 423 nt3.57□□□□□ -1.84
HCA4P20448 SSF2YDR312W 1362 nt3.57□□□□□ -1.84
HCA4P20448 URB2YJR041C 3525 nt3.57□□□□□ -1.84
HCA4P20448 MCM22YJR135C 720 nt3.57□□□□□ -1.84
HCA4P20448 YML009C-AYML009C-A 327 nt3.57□□□□□ -1.84
HCA4P20448 TVP18YMR071C 504 nt3.57□□□□□ -1.84
HCA4P20448 YBL039W-BYBL039W-B 180 nt3.57□□□□□ -1.84
HCA4P20448 YNL193WYNL193W 1677 nt3.57□□□□□ -1.84
HCA4P20448 TMA108YIL137C 2841 nt3.57□□□□□ -1.84
HCA4P20448 SKN7YHR206W 1869 nt3.56□□□□□ -1.84
HCA4P20448 YGR027W-BYGR027W-B 5268 nt3.56□□□□□ -1.84
HCA4P20448 YLR227W-BYLR227W-B 5268 nt3.56□□□□□ -1.84
HCA4P20448 YPR158C-DYPR158C-D 5268 nt3.56□□□□□ -1.84
HCA4P20448 ARO1YDR127W 4767 nt3.56□□□□□ -1.84
HCA4P20448 KAP95YLR347C 2586 nt3.56□□□□□ -1.84
HCA4P20448 YLR434CYLR434C 384 nt3.56□□□□□ -1.84
HCA4P20448 YMR031W-AYMR031W-A 327 nt3.56□□□□□ -1.84
HCA4P20448 MAK5YBR142W 2322 nt3.56□□□□□ -1.84
HCA4P20448 DNM1YLL001W 2274 nt3.56□□□□□ -1.84
HCA4P20448 VBA4YDR119W 2307 nt3.55□□□□□ -1.84
HCA4P20448 UTP15YMR093W 1542 nt3.55□□□□□ -1.84
HCA4P20448 SPE1YKL184W 1401 nt3.55□□□□□ -1.84
HCA4P20448 YDR338CYDR338C 2088 nt3.55□□□□□ -1.84
HCA4P20448 snR8snR8 190 nt3.55□□□□□ -1.84
HCA4P20448 tF(GAA)DtF(GAA)D 73 nt3.55□□□□□ -1.84
HCA4P20448 tF(GAA)NtF(GAA)N 73 nt3.55□□□□□ -1.84
HCA4P20448 LIF1YGL090W 1266 nt3.55□□□□□ -1.84
HCA4P20448 USE1YGL098W 738 nt3.55□□□□□ -1.84
HCA4P20448 YKL068W-AYKL068W-A 237 nt3.55□□□□□ -1.84
HCA4P20448 YMR141CYMR141C 309 nt3.55□□□□□ -1.84
HCA4P20448 YMR304C-AYMR304C-A 351 nt3.55□□□□□ -1.84
HCA4P20448 REG1YDR028C 3045 nt3.54□□□□□ -1.84
HCA4P20448 ETP1YHL010C 1758 nt3.54□□□□□ -1.84
HCA4P20448 FLO9YAL063C 3969 nt3.54□□□□□ -1.84
HCA4P20448 MSH4YFL003C 2637 nt3.54□□□□□ -1.84
HCA4P20448 YCR018C-AYCR018C-A 255 nt3.54□□□□□ -1.84
HCA4P20448 HMRA2YCR096C 360 nt3.54□□□□□ -1.84
HCA4P20448 IRC2YDR112W 309 nt3.54□□□□□ -1.84
HCA4P20448 YDR537CYDR537C 606 nt3.54□□□□□ -1.84
HCA4P20448 AAD16YFL057C 459 nt3.54□□□□□ -1.84
HCA4P20448 YIL054WYIL054W 318 nt3.54□□□□□ -1.84
HCA4P20448 SRL3YKR091W 741 nt3.54□□□□□ -1.84
HCA4P20448 COX8YLR395C 237 nt3.54□□□□□ -1.84
HCA4P20448 YMR013C-AYMR013C-A 150 nt3.54□□□□□ -1.84
HCA4P20448 CDC33YOL139C 642 nt3.54□□□□□ -1.84
HCA4P20448 IRC16YPR038W 360 nt3.54□□□□□ -1.84
HCA4P20448 YPR077CYPR077C 372 nt3.54□□□□□ -1.84
HCA4P20448 STP2YHR006W 1626 nt3.54□□□□□ -1.84
HCA4P20448 CDC55YGL190C 1581 nt3.54□□□□□ -1.84
HCA4P20448 KAR9YPL269W 1935 nt3.54□□□□□ -1.84
HCA4P20448 HAA1YPR008W 2085 nt3.53□□□□□ -1.84
HCA4P20448 YCR090CYCR090C 549 nt3.53□□□□□ -1.84
HCA4P20448 NHP2YDL208W 471 nt3.53□□□□□ -1.84
HCA4P20448 YER137W-AYER137W-A 306 nt3.53□□□□□ -1.84
HCA4P20448 YHL037CYHL037C 402 nt3.53□□□□□ -1.84
HCA4P20448 YHR052W-AYHR052W-A 195 nt3.53□□□□□ -1.84
HCA4P20448 YHR054W-AYHR054W-A 195 nt3.53□□□□□ -1.84
HCA4P20448 YLR269CYLR269C 351 nt3.53□□□□□ -1.84
HCA4P20448 NSL1YPL233W 651 nt3.53□□□□□ -1.84
HCA4P20448 YPR010C-AYPR010C-A 219 nt3.53□□□□□ -1.84
HCA4P20448 RPS23BYPR132W 438 nt3.53□□□□□ -1.84
HCA4P20448 NTC20YBR188C 423 nt3.53□□□□□ -1.84
HCA4P20448 HOP1YIL072W 1818 nt3.53□□□□□ -1.84
HCA4P20448 FAS1YKL182W 6156 nt3.53□□□□□ -1.84
HCA4P20448 POL2YNL262W 6669 nt3.53□□□□□ -1.84
HCA4P20448 EPL1YFL024C 2499 nt3.52□□□□□ -1.85
HCA4P20448 GYL1YMR192W 2163 nt3.52□□□□□ -1.85
HCA4P20448 RPN2YIL075C 2838 nt3.52□□□□□ -1.85
HCA4P20448 YDL152WYDL152W 366 nt3.52□□□□□ -1.85
HCA4P20448 RPB9YGL070C 369 nt3.52□□□□□ -1.85
HCA4P20448 UNG1YML021C 1080 nt3.52□□□□□ -1.85
HCA4P20448 PFY1YOR122C 381 nt3.52□□□□□ -1.85
HCA4P20448 UBP5YER144C 2418 nt3.52□□□□□ -1.85
HCA4P20448 MET10YFR030W 3108 nt3.52□□□□□ -1.85
HCA4P20448 PCK1YKR097W 1650 nt3.52□□□□□ -1.85
HCA4P20448 STT4YLR305C 5703 nt3.52□□□□□ -1.85
HCA4P20448 FLO5YHR211W 3228 nt3.51□□□□□ -1.85
HCA4P20448 FAA2YER015W 2235 nt3.51□□□□□ -1.85
HCA4P20448 KHA1YJL094C 2622 nt3.51□□□□□ -1.85
HCA4P20448 STE14YDR410C 720 nt3.51□□□□□ -1.85
HCA4P20448 YGR053CYGR053C 852 nt3.51□□□□□ -1.85
HCA4P20448 tQ(UUG)BtQ(UUG)B 72 nt3.51□□□□□ -1.85
HCA4P20448 YBR032WYBR032W 303 nt3.51□□□□□ -1.85
HCA4P20448 PIS1YPR113W 663 nt3.51□□□□□ -1.85
HCA4P20448 FUN30YAL019W 3396 nt3.51□□□□□ -1.85
HCA4P20448 STE23YLR389C 3084 nt3.51□□□□□ -1.85
HCA4P20448 YRR1YOR162C 2433 nt3.51□□□□□ -1.85
HCA4P20448 SET1YHR119W 3243 nt3.51□□□□□ -1.85
HCA4P20448 CWH41YGL027C 2502 nt3.5□□□□□ -1.85
HCA4P20448 DSF2YBR007C 2211 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms