Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRP01130 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRP01130 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRP01130 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRP01130 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LDLRP01130 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.83■□□□□ 0.77
LDLRP01130 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.83■□□□□ 0.77
LDLRP01130 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.83■□□□□ 0.77
LDLRP01130 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.83■□□□□ 0.77
LDLRP01130 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRP01130 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.83■□□□□ 0.77
LDLRP01130 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.83■□□□□ 0.76
LDLRP01130 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LDLRP01130 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LDLRP01130 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 GABARAPL3-202ENST00000624044 1851 ntBASIC19.83■□□□□ 0.76
LDLRP01130 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LDLRP01130 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
LDLRP01130 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LDLRP01130 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
LDLRP01130 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRP01130 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 CROCCP5-201ENST00000436658 830 ntBASIC19.82■□□□□ 0.76
LDLRP01130 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LDLRP01130 AC010525.1-201ENST00000585559 441 ntBASIC19.82■□□□□ 0.76
LDLRP01130 AL499627.2-201ENST00000606283 725 ntBASIC19.82■□□□□ 0.76
LDLRP01130 BID-214ENST00000617586 542 ntTSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LDLRP01130 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LDLRP01130 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRP01130 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
LDLRP01130 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LDLRP01130 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.81■□□□□ 0.76
LDLRP01130 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.81■□□□□ 0.76
LDLRP01130 AC105233.4-201ENST00000642045 216 ntBASIC19.81■□□□□ 0.76
LDLRP01130 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
LDLRP01130 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDLRP01130 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LDLRP01130 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.8■□□□□ 0.76
LDLRP01130 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.8■□□□□ 0.76
LDLRP01130 NCF1B-203ENST00000435988 1254 ntBASIC19.8■□□□□ 0.76
LDLRP01130 OR2I1P-207ENST00000453522 948 ntBASIC19.8■□□□□ 0.76
LDLRP01130 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LDLRP01130 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDLRP01130 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.8■□□□□ 0.76
LDLRP01130 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRP01130 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRP01130 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.79■□□□□ 0.76
LDLRP01130 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.79■□□□□ 0.76
LDLRP01130 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRP01130 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDLRP01130 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.79■□□□□ 0.76
LDLRP01130 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.79■□□□□ 0.76
LDLRP01130 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.79■□□□□ 0.76
LDLRP01130 CD99P1-205ENST00000527459 561 ntBASIC19.79■□□□□ 0.76
LDLRP01130 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.79■□□□□ 0.76
LDLRP01130 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.79■□□□□ 0.76
LDLRP01130 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms