Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 POU5F1P4-201ENST00000413175 1085 ntBASIC19.3■□□□□ 0.68
SNX4O95219 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX4O95219 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX4O95219 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX4O95219 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.3■□□□□ 0.68
SNX4O95219 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SNX4O95219 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX4O95219 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
SNX4O95219 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX4O95219 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX4O95219 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNX4O95219 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.29■□□□□ 0.68
SNX4O95219 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX4O95219 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX4O95219 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX4O95219 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNX4O95219 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX4O95219 SLC7A5P1-201ENST00000568957 537 ntBASIC19.28■□□□□ 0.68
SNX4O95219 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.28■□□□□ 0.68
SNX4O95219 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.28■□□□□ 0.68
SNX4O95219 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX4O95219 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX4O95219 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX4O95219 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX4O95219 UBE2DNL-204ENST00000602536 740 ntBASIC19.27■□□□□ 0.68
SNX4O95219 AC080038.1-201ENST00000611274 1154 ntBASIC19.27■□□□□ 0.68
SNX4O95219 RARRES2P11-201ENST00000635158 484 ntBASIC19.27■□□□□ 0.68
SNX4O95219 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNX4O95219 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX4O95219 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX4O95219 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
SNX4O95219 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX4O95219 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SNX4O95219 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 AC026471.6-201ENST00000622954 1905 ntBASIC19.26■□□□□ 0.67
SNX4O95219 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX4O95219 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX4O95219 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX4O95219 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 AC011767.1-201ENST00000617410 1153 ntBASIC19.26■□□□□ 0.67
SNX4O95219 MYCNOS-205ENST00000641950 531 ntBASIC19.26■□□□□ 0.67
SNX4O95219 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX4O95219 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNX4O95219 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX4O95219 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX4O95219 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX4O95219 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX4O95219 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX4O95219 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms