Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 OR2I1P-207ENST00000453522 948 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.81■□□□□ 0.28
SCAF4O95104 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.81■□□□□ 0.28
SCAF4O95104 pRNA.6-201ENST00000610482 90 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 pRNA.5-201ENST00000612139 90 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.81■□□□□ 0.28
SCAF4O95104 pRNA.11-201ENST00000618423 90 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 pRNA.13-201ENST00000619112 90 ntBASIC16.81■□□□□ 0.28
SCAF4O95104 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.8■□□□□ 0.28
SCAF4O95104 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
SCAF4O95104 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
SCAF4O95104 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.8■□□□□ 0.28
SCAF4O95104 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 AL136162.1-201ENST00000607711 1078 ntBASIC16.8■□□□□ 0.28
SCAF4O95104 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCAF4O95104 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SCAF4O95104 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCAF4O95104 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCAF4O95104 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCAF4O95104 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SCAF4O95104 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.79■□□□□ 0.28
SCAF4O95104 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAF4O95104 SERBP1P1-201ENST00000396021 1160 ntBASIC16.79■□□□□ 0.28
SCAF4O95104 PBX2P1-201ENST00000493219 1291 ntBASIC16.79■□□□□ 0.28
SCAF4O95104 AC110285.6-201ENST00000617652 491 ntBASIC16.79■□□□□ 0.28
SCAF4O95104 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.79■□□□□ 0.28
SCAF4O95104 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.79■□□□□ 0.28
SCAF4O95104 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCAF4O95104 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SCAF4O95104 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SCAF4O95104 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
SCAF4O95104 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCAF4O95104 AL139246.5-201ENST00000606645 996 ntBASIC16.78■□□□□ 0.28
SCAF4O95104 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
SCAF4O95104 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SCAF4O95104 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCAF4O95104 PCDHAC2-203ENST00000615316 3011 ntBASIC16.78■□□□□ 0.28
SCAF4O95104 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.77■□□□□ 0.28
SCAF4O95104 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.77■□□□□ 0.28
SCAF4O95104 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.77■□□□□ 0.28
SCAF4O95104 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCAF4O95104 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.77■□□□□ 0.28
SCAF4O95104 AC135279.3-201ENST00000610945 1311 ntBASIC16.77■□□□□ 0.28
SCAF4O95104 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.77■□□□□ 0.28
SCAF4O95104 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.77■□□□□ 0.28
SCAF4O95104 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCAF4O95104 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms