Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF9O43307 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF9O43307 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF9O43307 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF9O43307 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
ARHGEF9O43307 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF9O43307 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 AC003102.1-202ENST00000563394 1796 ntBASIC19.01■□□□□ 0.63
ARHGEF9O43307 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF9O43307 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF9O43307 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19■□□□□ 0.63
ARHGEF9O43307 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19■□□□□ 0.63
ARHGEF9O43307 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF9O43307 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF9O43307 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19■□□□□ 0.63
ARHGEF9O43307 CCDC92B-201ENST00000575506 885 ntBASIC19■□□□□ 0.63
ARHGEF9O43307 LINC02228-203ENST00000641970 1355 ntBASIC19■□□□□ 0.63
ARHGEF9O43307 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 FEM1AP4-201ENST00000443167 1987 ntBASIC19■□□□□ 0.63
ARHGEF9O43307 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF9O43307 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 MIR6084-201ENST00000622012 110 ntBASIC18.99■□□□□ 0.63
ARHGEF9O43307 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF9O43307 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.99■□□□□ 0.63
ARHGEF9O43307 AC090340.1-201ENST00000620778 4980 ntBASIC18.99■□□□□ 0.63
ARHGEF9O43307 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 KRT18P14-201ENST00000534205 1250 ntBASIC18.98■□□□□ 0.63
ARHGEF9O43307 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 AP006587.3-201ENST00000525742 1516 ntBASIC18.98■□□□□ 0.63
ARHGEF9O43307 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 LINC01521-201ENST00000504184 1943 ntBASIC18.98■□□□□ 0.63
ARHGEF9O43307 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
ARHGEF9O43307 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF9O43307 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF9O43307 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ARHGEF9O43307 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms