Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COPEO14579 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.6■□□□□ 0.89
COPEO14579 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.6■□□□□ 0.89
COPEO14579 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.6■□□□□ 0.89
COPEO14579 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COPEO14579 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COPEO14579 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.59■□□□□ 0.89
COPEO14579 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COPEO14579 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
COPEO14579 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COPEO14579 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.59■□□□□ 0.89
COPEO14579 AC131281.2-201ENST00000520478 145 ntBASIC20.59■□□□□ 0.89
COPEO14579 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COPEO14579 AC126544.1-201ENST00000580842 1059 ntBASIC20.59■□□□□ 0.89
COPEO14579 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.59■□□□□ 0.89
COPEO14579 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.59■□□□□ 0.89
COPEO14579 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPEO14579 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
COPEO14579 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.58■□□□□ 0.89
COPEO14579 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 AC005224.4-201ENST00000583262 1652 ntBASIC20.58■□□□□ 0.89
COPEO14579 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.89
COPEO14579 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
COPEO14579 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 AC011484.1-201ENST00000377652 1995 ntBASIC20.58■□□□□ 0.89
COPEO14579 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPEO14579 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.58■□□□□ 0.89
COPEO14579 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.58■□□□□ 0.89
COPEO14579 MIR4767-201ENST00000582827 78 ntBASIC20.58■□□□□ 0.89
COPEO14579 AC233992.3-201ENST00000607491 485 ntBASIC20.58■□□□□ 0.89
COPEO14579 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COPEO14579 AC099778.1-201ENST00000568593 1911 ntBASIC20.58■□□□□ 0.88
COPEO14579 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COPEO14579 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.58■□□□□ 0.88
COPEO14579 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COPEO14579 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
COPEO14579 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
COPEO14579 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPEO14579 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
COPEO14579 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPEO14579 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.57■□□□□ 0.88
COPEO14579 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.57■□□□□ 0.88
COPEO14579 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPEO14579 IGHV3-19-201ENST00000521488 291 ntBASIC20.57■□□□□ 0.88
COPEO14579 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPEO14579 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPEO14579 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
COPEO14579 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.57■□□□□ 0.88
COPEO14579 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.56■□□□□ 0.88
COPEO14579 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.56■□□□□ 0.88
COPEO14579 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.56■□□□□ 0.88
COPEO14579 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.56■□□□□ 0.88
COPEO14579 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
COPEO14579 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPEO14579 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COPEO14579 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COPEO14579 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.55■□□□□ 0.88
COPEO14579 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.55■□□□□ 0.88
COPEO14579 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPEO14579 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.55■□□□□ 0.88
COPEO14579 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
COPEO14579 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
COPEO14579 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPEO14579 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COPEO14579 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPEO14579 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms