Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 LINC01854-201ENST00000375987 2213 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 EFCAB11-208ENST00000555872 2716 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 CHRM3-207ENST00000615928 2294 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 SALRNA2-201ENST00000629082 2066 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 BECN1-202ENST00000438274 1569 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 VN1R4-201ENST00000311170 1048 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 RNA5SP452-201ENST00000363004 119 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 MTIF3-201ENST00000381116 1104 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AL590286.1-201ENST00000404178 291 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 NIP7P3-201ENST00000404319 515 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AL590133.1-201ENST00000412838 368 ntTSL 3 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 GAPDHP64-201ENST00000419696 1003 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 HLA-T-206ENST00000429813 450 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AC112247.1-201ENST00000436268 657 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 MICC-201ENST00000445710 1055 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 GAPDHP45-201ENST00000452090 349 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AC055716.1-201ENST00000550077 495 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 SRGAP2D-201ENST00000605551 1021 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 PRSS3P3-202ENST00000618042 682 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AL133461.1-201ENST00000634073 268 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 COL12A1-203ENST00000416123 8964 ntTSL 5 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 NREP-201ENST00000257435 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AC020558.3-201ENST00000623335 1703 ntBASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 OXGR1-201ENST00000298440 2285 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 ALKBH8-206ENST00000429370 2296 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 AL807761.4-201ENST00000439901 2277 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 SLC25A52-201ENST00000269205 1319 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCE2Q6PIF2 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 PPP1R26-AS1-202ENST00000603624 2919 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CLDN19-203ENST00000539749 3517 ntTSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC040160.1-201ENST00000573063 2677 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC118344.2-201ENST00000622968 4765 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 SNORA42.2-201ENST00000384771 134 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AL355297.1-201ENST00000402808 388 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 RPS12P20-201ENST00000464109 380 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 RPSAP36-201ENST00000465940 869 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC017013.1-201ENST00000506459 799 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC006927.1-201ENST00000544818 498 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC010650.1-201ENST00000567559 494 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AL356458.1-201ENST00000604764 465 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 ZNF75A-209ENST00000612186 1118 ntBASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 TMEM52B-201ENST00000298530 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CATSPER2-203ENST00000396879 3898 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 KLHL32-204ENST00000536676 3699 ntTSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CELF2-207ENST00000609692 2210 ntTSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 ZNF263-201ENST00000219069 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms