Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HPF1Q9NWY4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
HPF1Q9NWY4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HPF1Q9NWY4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 EP400NL-214ENST00000641289 2402 ntBASIC19.13■□□□□ 0.65
HPF1Q9NWY4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPF1Q9NWY4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 MKRN4P-201ENST00000444706 1521 ntBASIC19.12■□□□□ 0.65
HPF1Q9NWY4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 CDV3P1-201ENST00000471403 739 ntBASIC19.12■□□□□ 0.65
HPF1Q9NWY4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 AC016405.3-201ENST00000607710 860 ntBASIC19.12■□□□□ 0.65
HPF1Q9NWY4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPF1Q9NWY4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 AC091799.1-201ENST00000422823 811 ntBASIC19.11■□□□□ 0.65
HPF1Q9NWY4 GUSBP6-202ENST00000438529 1198 ntBASIC19.11■□□□□ 0.65
HPF1Q9NWY4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPF1Q9NWY4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 AL512625.2-201ENST00000417533 625 ntBASIC19.1■□□□□ 0.65
HPF1Q9NWY4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 RARRES2P4-201ENST00000514074 484 ntBASIC19.1■□□□□ 0.65
HPF1Q9NWY4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.1■□□□□ 0.65
HPF1Q9NWY4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms