Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.25■■□□□ 1.15
SIX2Q9NPC8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 AC019069.1-201ENST00000610008 1333 ntBASIC22.24■■□□□ 1.15
SIX2Q9NPC8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SIX2Q9NPC8 AL121603.2-201ENST00000557373 2117 ntBASIC22.24■■□□□ 1.15
SIX2Q9NPC8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 RBM17P2-201ENST00000616397 1405 ntBASIC22.23■■□□□ 1.15
SIX2Q9NPC8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 AC097381.1-201ENST00000429019 1296 ntBASIC22.23■■□□□ 1.15
SIX2Q9NPC8 SLC7A5P1-201ENST00000568957 537 ntBASIC22.23■■□□□ 1.15
SIX2Q9NPC8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 AC020907.5-201ENST00000624372 1936 ntBASIC22.23■■□□□ 1.15
SIX2Q9NPC8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX2Q9NPC8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 AC091799.1-201ENST00000422823 811 ntBASIC22.22■■□□□ 1.15
SIX2Q9NPC8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 AC087623.3-201ENST00000607047 1098 ntBASIC22.22■■□□□ 1.15
SIX2Q9NPC8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.22■■□□□ 1.15
SIX2Q9NPC8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 AC243732.1-201ENST00000612648 864 ntBASIC22.21■■□□□ 1.15
SIX2Q9NPC8 MIR6821-201ENST00000617625 74 ntBASIC22.21■■□□□ 1.15
SIX2Q9NPC8 SLC25A24-204ENST00000569674 2357 ntBASIC22.21■■□□□ 1.15
SIX2Q9NPC8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX2Q9NPC8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.2■■□□□ 1.15
SIX2Q9NPC8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SIX2Q9NPC8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SIX2Q9NPC8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SIX2Q9NPC8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.2■■□□□ 1.14
SIX2Q9NPC8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX2Q9NPC8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms