Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF39Q9H2S5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF39Q9H2S5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 MTATP6P17-201ENST00000431030 672 ntBASIC22.71■■□□□ 1.23
RNF39Q9H2S5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 AC079791.1-201ENST00000605356 973 ntBASIC22.71■■□□□ 1.23
RNF39Q9H2S5 AC008694.1-202ENST00000636953 945 ntBASIC22.71■■□□□ 1.23
RNF39Q9H2S5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF39Q9H2S5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RNF39Q9H2S5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RNF39Q9H2S5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 AL512625.2-201ENST00000417533 625 ntBASIC22.7■■□□□ 1.22
RNF39Q9H2S5 KRT18P6-201ENST00000555540 1265 ntBASIC22.7■■□□□ 1.22
RNF39Q9H2S5 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 AC069236.1-201ENST00000604339 616 ntBASIC22.7■■□□□ 1.22
RNF39Q9H2S5 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF39Q9H2S5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 ABHD17AP1-201ENST00000358206 933 ntBASIC22.69■■□□□ 1.22
RNF39Q9H2S5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 AC073210.2-201ENST00000430369 194 ntBASIC22.69■■□□□ 1.22
RNF39Q9H2S5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 CD99P1-205ENST00000527459 561 ntBASIC22.69■■□□□ 1.22
RNF39Q9H2S5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF39Q9H2S5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 AC091799.1-201ENST00000422823 811 ntBASIC22.68■■□□□ 1.22
RNF39Q9H2S5 RARRES2P4-201ENST00000514074 484 ntBASIC22.68■■□□□ 1.22
RNF39Q9H2S5 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 AC122134.1-202ENST00000569111 1201 ntBASIC22.68■■□□□ 1.22
RNF39Q9H2S5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 AC133041.1-202ENST00000642053 222 ntBASIC22.68■■□□□ 1.22
RNF39Q9H2S5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF39Q9H2S5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 AL162412.1-201ENST00000567129 965 ntBASIC22.67■■□□□ 1.22
RNF39Q9H2S5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 ECEL1P1-201ENST00000373592 1742 ntBASIC22.67■■□□□ 1.22
RNF39Q9H2S5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF39Q9H2S5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 AC133561.1-201ENST00000568600 2415 ntBASIC22.66■■□□□ 1.22
RNF39Q9H2S5 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.66■■□□□ 1.22
RNF39Q9H2S5 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF39Q9H2S5 AC010980.2-201ENST00000587099 1412 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms