Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 AL512625.2-201ENST00000417533 625 ntBASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 AC091799.1-201ENST00000422823 811 ntBASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.23■□□□□ 0.35
SSBP3Q9BWW4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 AL137060.1-201ENST00000618151 2648 ntBASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 RARRES2P4-201ENST00000514074 484 ntBASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 AC142086.2-201ENST00000569753 217 ntBASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.22■□□□□ 0.35
SSBP3Q9BWW4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 AC093787.1-201ENST00000450396 207 ntBASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSBP3Q9BWW4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.21■□□□□ 0.34
SSBP3Q9BWW4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSBP3Q9BWW4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.21■□□□□ 0.34
SSBP3Q9BWW4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.21■□□□□ 0.34
SSBP3Q9BWW4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 FAM21FP-204ENST00000608637 956 ntBASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 AC244015.2-201ENST00000616358 1861 ntBASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 FBXW4P1-201ENST00000426721 2239 ntBASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSBP3Q9BWW4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.19■□□□□ 0.34
SSBP3Q9BWW4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms