Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.36■□□□□ 0.53
USB1Q9BQ65 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.36■□□□□ 0.53
USB1Q9BQ65 CNN2P6-201ENST00000439038 900 ntBASIC18.36■□□□□ 0.53
USB1Q9BQ65 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USB1Q9BQ65 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 AC080038.3-201ENST00000623346 1952 ntBASIC18.35■□□□□ 0.53
USB1Q9BQ65 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 AC104771.1-201ENST00000603335 964 ntBASIC18.35■□□□□ 0.53
USB1Q9BQ65 AC069236.1-201ENST00000604339 616 ntBASIC18.35■□□□□ 0.53
USB1Q9BQ65 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
USB1Q9BQ65 OR10C1-204ENST00000622521 1039 ntBASIC18.35■□□□□ 0.53
USB1Q9BQ65 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USB1Q9BQ65 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 SLC29A4P1-201ENST00000398760 971 ntBASIC18.34■□□□□ 0.53
USB1Q9BQ65 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 AC083906.2-201ENST00000511578 360 ntBASIC18.34■□□□□ 0.53
USB1Q9BQ65 AF201337.1-201ENST00000520239 748 ntBASIC18.34■□□□□ 0.53
USB1Q9BQ65 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.34■□□□□ 0.53
USB1Q9BQ65 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USB1Q9BQ65 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USB1Q9BQ65 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USB1Q9BQ65 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USB1Q9BQ65 AL512625.2-201ENST00000417533 625 ntBASIC18.33■□□□□ 0.52
USB1Q9BQ65 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 AL591742.1-201ENST00000604433 565 ntBASIC18.33■□□□□ 0.52
USB1Q9BQ65 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USB1Q9BQ65 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USB1Q9BQ65 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
USB1Q9BQ65 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USB1Q9BQ65 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USB1Q9BQ65 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 RBM17P2-201ENST00000616397 1405 ntBASIC18.32■□□□□ 0.52
USB1Q9BQ65 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms