Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.52■□□□□ 0.24
RNF5Q99942 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RNF5Q99942 KRT18P5-201ENST00000436075 1291 ntBASIC16.52■□□□□ 0.24
RNF5Q99942 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF5Q99942 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF5Q99942 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF5Q99942 AL162412.1-201ENST00000567129 965 ntBASIC16.52■□□□□ 0.24
RNF5Q99942 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF5Q99942 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF5Q99942 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF5Q99942 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF5Q99942 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF5Q99942 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF5Q99942 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF5Q99942 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF5Q99942 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF5Q99942 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF5Q99942 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF5Q99942 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF5Q99942 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF5Q99942 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF5Q99942 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 AC007322.3-201ENST00000426526 701 ntBASIC16.51■□□□□ 0.23
RNF5Q99942 TERF1P5-201ENST00000477545 1207 ntBASIC16.51■□□□□ 0.23
RNF5Q99942 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF5Q99942 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF5Q99942 AC137761.2-201ENST00000561729 223 ntBASIC16.51■□□□□ 0.23
RNF5Q99942 AC145350.3-201ENST00000569033 163 ntBASIC16.51■□□□□ 0.23
RNF5Q99942 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF5Q99942 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
RNF5Q99942 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF5Q99942 AC027702.1-201ENST00000563810 1770 ntBASIC16.51■□□□□ 0.23
RNF5Q99942 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF5Q99942 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF5Q99942 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF5Q99942 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 AC007225.1-201ENST00000566331 1836 ntBASIC16.5■□□□□ 0.23
RNF5Q99942 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF5Q99942 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF5Q99942 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF5Q99942 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF5Q99942 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF5Q99942 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF5Q99942 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF5Q99942 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF5Q99942 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF5Q99942 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF5Q99942 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF5Q99942 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF5Q99942 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF5Q99942 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF5Q99942 AC007322.4-201ENST00000509611 723 ntBASIC16.49■□□□□ 0.23
RNF5Q99942 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RNF5Q99942 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF5Q99942 AC010536.3-201ENST00000620306 533 ntBASIC16.49■□□□□ 0.23
RNF5Q99942 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF5Q99942 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF5Q99942 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF5Q99942 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF5Q99942 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF5Q99942 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RNF5Q99942 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 AC016769.1-201ENST00000409132 1010 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms