Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 MIR5787-201ENST00000611784 55 ntBASIC20.14■□□□□ 0.81
ATL1Q8WXF7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATL1Q8WXF7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 KRT18P11-201ENST00000435214 1283 ntBASIC20.13■□□□□ 0.81
ATL1Q8WXF7 KRT18P5-201ENST00000436075 1291 ntBASIC20.13■□□□□ 0.81
ATL1Q8WXF7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATL1Q8WXF7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.12■□□□□ 0.81
ATL1Q8WXF7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 UBE2DNL-204ENST00000602536 740 ntBASIC20.12■□□□□ 0.81
ATL1Q8WXF7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 MYCNOS-205ENST00000641950 531 ntBASIC20.12■□□□□ 0.81
ATL1Q8WXF7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 PLK5-205ENST00000642079 1969 ntBASIC20.12■□□□□ 0.81
ATL1Q8WXF7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATL1Q8WXF7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATL1Q8WXF7 RBM17P2-201ENST00000616397 1405 ntBASIC20.1■□□□□ 0.81
ATL1Q8WXF7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 AC137761.2-201ENST00000561729 223 ntBASIC20.1■□□□□ 0.81
ATL1Q8WXF7 AC145350.3-201ENST00000569033 163 ntBASIC20.1■□□□□ 0.81
ATL1Q8WXF7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATL1Q8WXF7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms