Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 AC007322.3-201ENST00000426526 701 ntBASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
SH3RF2Q8TEC5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 MCRIP2P1-201ENST00000394346 511 ntBASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 KRT18P29-201ENST00000397031 1267 ntBASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 ITM2C-210ENST00000620962 501 ntBASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 AC066615.1-201ENST00000640911 628 ntBASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF2Q8TEC5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF2Q8TEC5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 AC008687.6-201ENST00000596318 630 ntBASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SH3RF2Q8TEC5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SH3RF2Q8TEC5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 ESRRAP1-201ENST00000400596 1257 ntBASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF2Q8TEC5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms