Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAF1Q8N7H5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 AC011767.1-201ENST00000617410 1153 ntBASIC21.18■□□□□ 0.98
PAF1Q8N7H5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PAF1Q8N7H5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 AC006015.1-201ENST00000429970 570 ntBASIC21.17■□□□□ 0.98
PAF1Q8N7H5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 AC092437.1-201ENST00000624794 1048 ntBASIC21.17■□□□□ 0.98
PAF1Q8N7H5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.17■□□□□ 0.98
PAF1Q8N7H5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 AC244015.2-201ENST00000616358 1861 ntBASIC21.17■□□□□ 0.98
PAF1Q8N7H5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAF1Q8N7H5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAF1Q8N7H5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 KRT16P2-201ENST00000414673 1423 ntBASIC21.15■□□□□ 0.98
PAF1Q8N7H5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 AC080038.1-201ENST00000611274 1154 ntBASIC21.15■□□□□ 0.98
PAF1Q8N7H5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAF1Q8N7H5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms