Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC33Q8N5R6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC33Q8N5R6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC33Q8N5R6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC33Q8N5R6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC33Q8N5R6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC33Q8N5R6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 AC098934.4-201ENST00000564127 592 ntBASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC33Q8N5R6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 AC069152.1-201ENST00000438030 544 ntBASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 AC133552.2-202ENST00000575694 574 ntBASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 MIR4651-201ENST00000582622 73 ntBASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC33Q8N5R6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 AC061975.6-201ENST00000579045 1553 ntBASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 EEF1DP3-203ENST00000566025 782 ntBASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC33Q8N5R6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 TERF1P5-201ENST00000477545 1207 ntBASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 AC133041.1-202ENST00000642053 222 ntBASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms