Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 AC007375.3-201ENST00000600936 2314 ntBASIC18.65■□□□□ 0.58
RTL6Q6ICC9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 FAM201B-201ENST00000458407 597 ntBASIC18.65■□□□□ 0.58
RTL6Q6ICC9 AC083880.1-201ENST00000608266 535 ntBASIC18.65■□□□□ 0.58
RTL6Q6ICC9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 MYC-209ENST00000641252 345 ntBASIC18.65■□□□□ 0.58
RTL6Q6ICC9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL6Q6ICC9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 FAM99A-202ENST00000538190 1989 ntBASIC18.64■□□□□ 0.57
RTL6Q6ICC9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RTL6Q6ICC9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 AC091799.1-201ENST00000422823 811 ntBASIC18.63■□□□□ 0.57
RTL6Q6ICC9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RTL6Q6ICC9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.62■□□□□ 0.57
RTL6Q6ICC9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL6Q6ICC9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 AC097658.1-201ENST00000475555 843 ntBASIC18.61■□□□□ 0.57
RTL6Q6ICC9 AC091874.3-201ENST00000512672 1195 ntBASIC18.61■□□□□ 0.57
RTL6Q6ICC9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms