Protein–RNA interactions for Protein: Q5MIZ7

PPP4R3B, Serine/threonine-protein phosphatase 4 regulatory subunit 3B, humanhuman

Predictions only

Length 849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3BQ5MIZ7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3BQ5MIZ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
PPP4R3BQ5MIZ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 AC142086.2-201ENST00000569753 217 ntBASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
PPP4R3BQ5MIZ7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3BQ5MIZ7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 GUSBP6-202ENST00000438529 1198 ntBASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3BQ5MIZ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 AL355802.2-201ENST00000402069 882 ntBASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 AC091799.1-201ENST00000422823 811 ntBASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 RARRES2P4-201ENST00000514074 484 ntBASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 FAM21FP-204ENST00000608637 956 ntBASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R3BQ5MIZ7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3BQ5MIZ7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 AL391422.3-201ENST00000603791 2761 ntBASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 MKRN4P-201ENST00000444706 1521 ntBASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3BQ5MIZ7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
PPP4R3BQ5MIZ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PPP4R3BQ5MIZ7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms