Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.95■■□□□ 1.59
PDS5AQ29RF7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 HLA-B-256ENST00000639848 1089 ntBASIC24.95■■□□□ 1.58
PDS5AQ29RF7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.95■■□□□ 1.58
PDS5AQ29RF7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 UNC93B5-201ENST00000530315 699 ntBASIC24.94■■□□□ 1.58
PDS5AQ29RF7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 ITM2C-210ENST00000620962 501 ntBASIC24.94■■□□□ 1.58
PDS5AQ29RF7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PDS5AQ29RF7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDS5AQ29RF7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 AC060766.5-201ENST00000590539 871 ntBASIC24.92■■□□□ 1.58
PDS5AQ29RF7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.92■■□□□ 1.58
PDS5AQ29RF7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PDS5AQ29RF7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PDS5AQ29RF7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 PGM5P4-201ENST00000421970 445 ntBASIC24.89■■□□□ 1.58
PDS5AQ29RF7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 Z98882.1-201ENST00000622160 2253 ntBASIC24.89■■□□□ 1.58
PDS5AQ29RF7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.89■■□□□ 1.58
PDS5AQ29RF7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms