Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC061975.6-201ENST00000579045 1553 ntBASIC13.63□□□□□ -0.23
SYCNQ0VAF6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC138907.5-202ENST00000569484 235 ntBASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 AC006128.1-201ENST00000624704 1661 ntBASIC13.63□□□□□ -0.23
SYCNQ0VAF6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SYCNQ0VAF6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 YBX1P1-201ENST00000445822 960 ntBASIC13.62□□□□□ -0.23
SYCNQ0VAF6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.62□□□□□ -0.23
SYCNQ0VAF6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SYCNQ0VAF6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L2-201ENST00000561772 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L6-201ENST00000626483 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L1-201ENST00000627662 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L8-201ENST00000629013 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L3-201ENST00000630187 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L7-201ENST00000630678 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 DUX4L5-201ENST00000630834 1275 ntBASIC13.61□□□□□ -0.23
SYCNQ0VAF6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SYCNQ0VAF6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.6□□□□□ -0.23
SYCNQ0VAF6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.6□□□□□ -0.23
SYCNQ0VAF6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SYCNQ0VAF6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SYCNQ0VAF6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SYCNQ0VAF6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms