Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 RPL16BYNL069C 597 nt1.6□□□□□ -2.15
HRD1Q08109 CHC1YGL206C 4962 nt1.6□□□□□ -2.15
HRD1Q08109 VPH1YOR270C 2523 nt1.6□□□□□ -2.15
HRD1Q08109 NOP12YOL041C 1380 nt1.59□□□□□ -2.15
HRD1Q08109 SSQ1YLR369W 1974 nt1.59□□□□□ -2.15
HRD1Q08109 MAK11YKL021C 1407 nt1.59□□□□□ -2.15
HRD1Q08109 HER1YOR227W 3741 nt1.59□□□□□ -2.15
HRD1Q08109 SST2YLR452C 2097 nt1.59□□□□□ -2.15
HRD1Q08109 RUD3YOR216C 1455 nt1.59□□□□□ -2.15
HRD1Q08109 snR68snR68 136 nt1.59□□□□□ -2.15
HRD1Q08109 YDR124WYDR124W 975 nt1.59□□□□□ -2.15
HRD1Q08109 YIL012WYIL012W 342 nt1.59□□□□□ -2.15
HRD1Q08109 YAL037WYAL037W 804 nt1.59□□□□□ -2.15
HRD1Q08109 SPC24YMR117C 642 nt1.59□□□□□ -2.15
HRD1Q08109 NGL1YOL042W 1092 nt1.59□□□□□ -2.15
HRD1Q08109 SPP381YBR152W 876 nt1.59□□□□□ -2.15
HRD1Q08109 KAR5YMR065W 1515 nt1.59□□□□□ -2.16
HRD1Q08109 VPS34YLR240W 2628 nt1.59□□□□□ -2.16
HRD1Q08109 RTT107YHR154W 3213 nt1.59□□□□□ -2.16
HRD1Q08109 PEP1YBL017C 4740 nt1.58□□□□□ -2.16
HRD1Q08109 YCR013CYCR013C 648 nt1.58□□□□□ -2.16
HRD1Q08109 YDL032WYDL032W 312 nt1.58□□□□□ -2.16
HRD1Q08109 PEA2YER149C 1263 nt1.58□□□□□ -2.16
HRD1Q08109 YGR226CYGR226C 210 nt1.58□□□□□ -2.16
HRD1Q08109 EAF7YNL136W 1278 nt1.58□□□□□ -2.16
HRD1Q08109 APA1YCL050C 966 nt1.58□□□□□ -2.16
HRD1Q08109 CFT2YLR115W 2580 nt1.58□□□□□ -2.16
HRD1Q08109 HSH155YMR288W 2916 nt1.57□□□□□ -2.16
HRD1Q08109 PKH3YDR466W 2697 nt1.57□□□□□ -2.16
HRD1Q08109 IRC4YDR540C 540 nt1.57□□□□□ -2.16
HRD1Q08109 YER107W-AYER107W-A 321 nt1.57□□□□□ -2.16
HRD1Q08109 NNF1YJR112W 606 nt1.57□□□□□ -2.16
HRD1Q08109 YML084WYML084W 309 nt1.57□□□□□ -2.16
HRD1Q08109 TAF4YMR005W 1167 nt1.57□□□□□ -2.16
HRD1Q08109 LDH1YBR204C 1128 nt1.57□□□□□ -2.16
HRD1Q08109 UTP6YDR449C 1323 nt1.57□□□□□ -2.16
HRD1Q08109 MDM36YPR083W 1740 nt1.57□□□□□ -2.16
HRD1Q08109 RLF2YPR018W 1821 nt1.56□□□□□ -2.16
HRD1Q08109 RIT1YMR283C 1542 nt1.56□□□□□ -2.16
HRD1Q08109 VPS16YPL045W 2397 nt1.56□□□□□ -2.16
HRD1Q08109 NRG1YDR043C 696 nt1.56□□□□□ -2.16
HRD1Q08109 YOR114WYOR114W 885 nt1.56□□□□□ -2.16
HRD1Q08109 CCL1YPR025C 1182 nt1.56□□□□□ -2.16
HRD1Q08109 MED8YBR193C 672 nt1.56□□□□□ -2.16
HRD1Q08109 JJJ2YJL162C 1752 nt1.56□□□□□ -2.16
HRD1Q08109 DSE1YER124C 1722 nt1.55□□□□□ -2.16
HRD1Q08109 TRL1YJL087C 2484 nt1.55□□□□□ -2.16
HRD1Q08109 YFL015CYFL015C 495 nt1.55□□□□□ -2.16
HRD1Q08109 EDC1YGL222C 528 nt1.55□□□□□ -2.16
HRD1Q08109 SAY1YGR263C 1275 nt1.55□□□□□ -2.16
HRD1Q08109 YIL102C-AYIL102C-A 228 nt1.55□□□□□ -2.16
HRD1Q08109 RPA34YJL148W 702 nt1.55□□□□□ -2.16
HRD1Q08109 YLR379WYLR379W 375 nt1.55□□□□□ -2.16
HRD1Q08109 HUA2YOR284W 732 nt1.55□□□□□ -2.16
HRD1Q08109 RPC40YPR110C 1008 nt1.55□□□□□ -2.16
HRD1Q08109 ERV15YBR210W 429 nt1.55□□□□□ -2.16
HRD1Q08109 CAT2YML042W 2013 nt1.55□□□□□ -2.16
HRD1Q08109 ARP9YMR033W 1404 nt1.55□□□□□ -2.16
HRD1Q08109 RTP1YMR185W 2946 nt1.55□□□□□ -2.16
HRD1Q08109 UBP16YPL072W 1500 nt1.55□□□□□ -2.16
HRD1Q08109 YJL016WYJL016W 1686 nt1.55□□□□□ -2.16
HRD1Q08109 SBE22YHR103W 2559 nt1.54□□□□□ -2.16
HRD1Q08109 YHR182C-AYHR182C-A 474 nt1.54□□□□□ -2.16
HRD1Q08109 CKA1YIL035C 1119 nt1.54□□□□□ -2.16
HRD1Q08109 HRI1YLR301W 735 nt1.54□□□□□ -2.16
HRD1Q08109 IRC21YMR073C 606 nt1.54□□□□□ -2.16
HRD1Q08109 PEX15YOL044W 1152 nt1.54□□□□□ -2.16
HRD1Q08109 HRT1YOL133W 366 nt1.54□□□□□ -2.16
HRD1Q08109 YPR145C-AYPR145C-A 237 nt1.54□□□□□ -2.16
HRD1Q08109 YDR170W-AYDR170W-A 1323 nt1.54□□□□□ -2.16
HRD1Q08109 YNL284C-AYNL284C-A 1323 nt1.54□□□□□ -2.16
HRD1Q08109 YDR131CYDR131C 1671 nt1.53□□□□□ -2.16
HRD1Q08109 MFB1YDR219C 1398 nt1.53□□□□□ -2.16
HRD1Q08109 YER189WYER189W 369 nt1.53□□□□□ -2.16
HRD1Q08109 KEG1YFR042W 603 nt1.53□□□□□ -2.16
HRD1Q08109 YGL258W-AYGL258W-A 234 nt1.53□□□□□ -2.16
HRD1Q08109 YHL045WYHL045W 348 nt1.53□□□□□ -2.16
HRD1Q08109 MSA2YKR077W 1092 nt1.53□□□□□ -2.16
HRD1Q08109 SYM1YLR251W 594 nt1.53□□□□□ -2.16
HRD1Q08109 VPS38YLR360W 1320 nt1.53□□□□□ -2.16
HRD1Q08109 BLS1YLR408C 369 nt1.53□□□□□ -2.16
HRD1Q08109 RRP6YOR001W 2202 nt1.53□□□□□ -2.16
HRD1Q08109 BAS1YKR099W 2436 nt1.52□□□□□ -2.17
HRD1Q08109 NPR1YNL183C 2373 nt1.52□□□□□ -2.17
HRD1Q08109 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
HRD1Q08109 STD1YOR047C 1335 nt1.52□□□□□ -2.17
HRD1Q08109 YDL163WYDL163W 303 nt1.52□□□□□ -2.17
HRD1Q08109 CBS2YDR197W 1170 nt1.52□□□□□ -2.17
HRD1Q08109 YER068C-AYER068C-A 432 nt1.52□□□□□ -2.17
HRD1Q08109 YAL034C-BYAL034C-B 354 nt1.52□□□□□ -2.17
HRD1Q08109 YKR075W-AYKR075W-A 270 nt1.52□□□□□ -2.17
HRD1Q08109 ATG10YLL042C 504 nt1.52□□□□□ -2.17
HRD1Q08109 RIF2YLR453C 1188 nt1.52□□□□□ -2.17
HRD1Q08109 YML094C-AYML094C-A 402 nt1.52□□□□□ -2.17
HRD1Q08109 LSM2YBL026W 288 nt1.52□□□□□ -2.17
HRD1Q08109 YMR099CYMR099C 894 nt1.52□□□□□ -2.17
HRD1Q08109 MRPL44YMR225C 297 nt1.52□□□□□ -2.17
HRD1Q08109 YNL234WYNL234W 1281 nt1.52□□□□□ -2.17
HRD1Q08109 YOR392WYOR392W 444 nt1.52□□□□□ -2.17
HRD1Q08109 SAR1YPL218W 573 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms