Protein–RNA interactions for Protein: Q05541

NSE3, Non-structural maintenance of chromosome element 3, yeastyeast

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NSE3Q05541 YHR028W-AYHR028W-A 321 nt3.93□□□□□ -1.78
NSE3Q05541 SPC1YJR010C-A 285 nt3.93□□□□□ -1.78
NSE3Q05541 YPR170W-AYPR170W-A 186 nt3.93□□□□□ -1.78
NSE3Q05541 MES1YGR264C 2256 nt3.93□□□□□ -1.78
NSE3Q05541 SMC2YFR031C 3513 nt3.92□□□□□ -1.78
NSE3Q05541 JIP5YPR169W 1479 nt3.92□□□□□ -1.78
NSE3Q05541 SKP2YNL311C 2292 nt3.92□□□□□ -1.78
NSE3Q05541 ALY1YKR021W 2748 nt3.92□□□□□ -1.78
NSE3Q05541 FAP7YDL166C 594 nt3.92□□□□□ -1.78
NSE3Q05541 OTU2YHL013C 924 nt3.92□□□□□ -1.78
NSE3Q05541 BIG1YHR101C 1008 nt3.92□□□□□ -1.78
NSE3Q05541 snR41snR41 95 nt3.92□□□□□ -1.78
NSE3Q05541 HAA1YPR008W 2085 nt3.91□□□□□ -1.78
NSE3Q05541 FAA2YER015W 2235 nt3.91□□□□□ -1.78
NSE3Q05541 YDR114CYDR114C 303 nt3.91□□□□□ -1.78
NSE3Q05541 YHR175W-AYHR175W-A 150 nt3.91□□□□□ -1.78
NSE3Q05541 MBB1YJL199C 327 nt3.91□□□□□ -1.78
NSE3Q05541 RIO2YNL207W 1278 nt3.91□□□□□ -1.78
NSE3Q05541 MRPS9YBR146W 837 nt3.91□□□□□ -1.78
NSE3Q05541 PKH1YDR490C 2301 nt3.9□□□□□ -1.78
NSE3Q05541 ECO1YFR027W 846 nt3.9□□□□□ -1.79
NSE3Q05541 AGA2YGL032C 264 nt3.9□□□□□ -1.79
NSE3Q05541 RTS3YGR161C 792 nt3.9□□□□□ -1.79
NSE3Q05541 SDP1YIL113W 630 nt3.9□□□□□ -1.79
NSE3Q05541 MRP8YKL142W 660 nt3.9□□□□□ -1.79
NSE3Q05541 TVP18YMR071C 504 nt3.9□□□□□ -1.79
NSE3Q05541 YNL046WYNL046W 519 nt3.9□□□□□ -1.79
NSE3Q05541 RHO5YNL180C 996 nt3.9□□□□□ -1.79
NSE3Q05541 YDR034C-DYDR034C-D 5313 nt3.9□□□□□ -1.79
NSE3Q05541 YCK2YNL154C 1641 nt3.89□□□□□ -1.79
NSE3Q05541 NMA111YNL123W 2994 nt3.89□□□□□ -1.79
NSE3Q05541 YDR118W-AYDR118W-A 117 nt3.89□□□□□ -1.79
NSE3Q05541 NSA2YER126C 786 nt3.89□□□□□ -1.79
NSE3Q05541 YHL046W-AYHL046W-A 327 nt3.89□□□□□ -1.79
NSE3Q05541 IES3YLR052W 753 nt3.89□□□□□ -1.79
NSE3Q05541 OST6YML019W 999 nt3.89□□□□□ -1.79
NSE3Q05541 YNL146C-AYNL146C-A 195 nt3.89□□□□□ -1.79
NSE3Q05541 HEF3YNL014W 3135 nt3.89□□□□□ -1.79
NSE3Q05541 CHO2YGR157W 2610 nt3.89□□□□□ -1.79
NSE3Q05541 YJR030CYJR030C 2238 nt3.89□□□□□ -1.79
NSE3Q05541 YCR064CYCR064C 411 nt3.88□□□□□ -1.79
NSE3Q05541 YGL042CYGL042C 306 nt3.88□□□□□ -1.79
NSE3Q05541 tR(ACG)Q2tR(ACG)Q2 74 nt3.88□□□□□ -1.79
NSE3Q05541 ARV1YLR242C 966 nt3.88□□□□□ -1.79
NSE3Q05541 YMR001C-AYMR001C-A 231 nt3.88□□□□□ -1.79
NSE3Q05541 DBP10YDL031W 2988 nt3.88□□□□□ -1.79
NSE3Q05541 RPA190YOR341W 4995 nt3.88□□□□□ -1.79
NSE3Q05541 GDI1YER136W 1356 nt3.88□□□□□ -1.79
NSE3Q05541 MDV1YJL112W 2145 nt3.88□□□□□ -1.79
NSE3Q05541 SNT1YCR033W 3681 nt3.88□□□□□ -1.79
NSE3Q05541 DDR48YMR173W 1293 nt3.87□□□□□ -1.79
NSE3Q05541 RRD2YPL152W 1077 nt3.87□□□□□ -1.79
NSE3Q05541 PEX1YKL197C 3132 nt3.86□□□□□ -1.79
NSE3Q05541 COA4YLR218C 453 nt3.86□□□□□ -1.79
NSE3Q05541 YMR153C-AYMR153C-A 336 nt3.86□□□□□ -1.79
NSE3Q05541 YNL179CYNL179C 438 nt3.86□□□□□ -1.79
NSE3Q05541 RPS7AYOR096W 573 nt3.86□□□□□ -1.79
NSE3Q05541 HEM4YOR278W 828 nt3.86□□□□□ -1.79
NSE3Q05541 SWD3YBR175W 948 nt3.86□□□□□ -1.79
NSE3Q05541 snR54snR54 86 nt3.86□□□□□ -1.79
NSE3Q05541 PPN1YDR452W 2025 nt3.86□□□□□ -1.79
NSE3Q05541 PCI8YIL071C 1335 nt3.86□□□□□ -1.79
NSE3Q05541 YKR078WYKR078W 1758 nt3.86□□□□□ -1.79
NSE3Q05541 SMC3YJL074C 3693 nt3.85□□□□□ -1.79
NSE3Q05541 BIT61YJL058C 1632 nt3.85□□□□□ -1.79
NSE3Q05541 VAC8YEL013W 1737 nt3.85□□□□□ -1.79
NSE3Q05541 AHC2YCR082W 387 nt3.85□□□□□ -1.79
NSE3Q05541 PPH3YDR075W 927 nt3.85□□□□□ -1.79
NSE3Q05541 GET1YGL020C 708 nt3.85□□□□□ -1.79
NSE3Q05541 YLR334CYLR334C 381 nt3.85□□□□□ -1.79
NSE3Q05541 YLR406C-AYLR406C-A 150 nt3.85□□□□□ -1.79
NSE3Q05541 YML108WYML108W 318 nt3.85□□□□□ -1.79
NSE3Q05541 SEN15YMR059W 387 nt3.85□□□□□ -1.79
NSE3Q05541 NOP15YNL110C 663 nt3.85□□□□□ -1.79
NSE3Q05541 TFB1YDR311W 1929 nt3.85□□□□□ -1.79
NSE3Q05541 AVT2YEL064C 1443 nt3.85□□□□□ -1.79
NSE3Q05541 MUD2YKL074C 1584 nt3.85□□□□□ -1.79
NSE3Q05541 CIN8YEL061C 3003 nt3.84□□□□□ -1.79
NSE3Q05541 YCR081C-AYCR081C-A 237 nt3.84□□□□□ -1.79
NSE3Q05541 YDL242WYDL242W 354 nt3.84□□□□□ -1.79
NSE3Q05541 YER066C-AYER066C-A 501 nt3.84□□□□□ -1.79
NSE3Q05541 ERV1YGR029W 570 nt3.84□□□□□ -1.79
NSE3Q05541 tQ(UUG)BtQ(UUG)B 72 nt3.84□□□□□ -1.79
NSE3Q05541 YIL012WYIL012W 342 nt3.84□□□□□ -1.79
NSE3Q05541 EPL1YFL024C 2499 nt3.84□□□□□ -1.8
NSE3Q05541 SRC1YML034W 2505 nt3.83□□□□□ -1.8
NSE3Q05541 STU1YBL034C 4542 nt3.83□□□□□ -1.8
NSE3Q05541 SEA4YBL104C 3117 nt3.83□□□□□ -1.8
NSE3Q05541 BMH2YDR099W 822 nt3.83□□□□□ -1.8
NSE3Q05541 STE14YDR410C 720 nt3.83□□□□□ -1.8
NSE3Q05541 IES5YER092W 378 nt3.83□□□□□ -1.8
NSE3Q05541 AIM29YKR074W 468 nt3.83□□□□□ -1.8
NSE3Q05541 RAD33YML011C 534 nt3.83□□□□□ -1.8
NSE3Q05541 GIS2YNL255C 462 nt3.83□□□□□ -1.8
NSE3Q05541 SQS1YNL224C 2304 nt3.83□□□□□ -1.8
NSE3Q05541 NUP159YIL115C 4383 nt3.83□□□□□ -1.8
NSE3Q05541 SPP382YLR424W 2127 nt3.82□□□□□ -1.8
NSE3Q05541 YAL037WYAL037W 804 nt3.82□□□□□ -1.8
NSE3Q05541 YKL068W-AYKL068W-A 237 nt3.82□□□□□ -1.8
NSE3Q05541 HHT2YNL031C 411 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms