Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IRX4P78413 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.4■■□□□ 1.02
IRX4P78413 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
IRX4P78413 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.4■■□□□ 1.02
IRX4P78413 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.4■■□□□ 1.02
IRX4P78413 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.4■■□□□ 1.02
IRX4P78413 AF201337.1-201ENST00000520239 748 ntBASIC21.4■■□□□ 1.02
IRX4P78413 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
IRX4P78413 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.4■■□□□ 1.02
IRX4P78413 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
IRX4P78413 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
IRX4P78413 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IRX4P78413 AL121603.2-201ENST00000557373 2117 ntBASIC21.4■■□□□ 1.02
IRX4P78413 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.02
IRX4P78413 AC026471.6-201ENST00000622954 1905 ntBASIC21.39■■□□□ 1.02
IRX4P78413 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
IRX4P78413 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
IRX4P78413 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.39■■□□□ 1.01
IRX4P78413 MYCNOS-205ENST00000641950 531 ntBASIC21.39■■□□□ 1.01
IRX4P78413 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
IRX4P78413 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IRX4P78413 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.39■■□□□ 1.01
IRX4P78413 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
IRX4P78413 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
IRX4P78413 AC073210.2-201ENST00000430369 194 ntBASIC21.38■■□□□ 1.01
IRX4P78413 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.38■■□□□ 1.01
IRX4P78413 AC105036.2-201ENST00000569468 176 ntBASIC21.38■■□□□ 1.01
IRX4P78413 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IRX4P78413 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
IRX4P78413 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
IRX4P78413 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IRX4P78413 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
IRX4P78413 AC009237.3-201ENST00000393279 1427 ntBASIC21.38■■□□□ 1.01
IRX4P78413 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IRX4P78413 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.37■■□□□ 1.01
IRX4P78413 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.37■■□□□ 1.01
IRX4P78413 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.37■■□□□ 1.01
IRX4P78413 AP001160.3-201ENST00000601484 763 ntBASIC21.37■■□□□ 1.01
IRX4P78413 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
IRX4P78413 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IRX4P78413 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
IRX4P78413 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
IRX4P78413 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.36■■□□□ 1.01
IRX4P78413 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.36■■□□□ 1.01
IRX4P78413 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.36■■□□□ 1.01
IRX4P78413 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
IRX4P78413 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
IRX4P78413 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
IRX4P78413 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 AC098934.4-201ENST00000564127 592 ntBASIC21.36■■□□□ 1.01
IRX4P78413 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.36■■□□□ 1.01
IRX4P78413 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
IRX4P78413 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
IRX4P78413 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
IRX4P78413 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.36■■□□□ 1.01
IRX4P78413 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
IRX4P78413 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.35■■□□□ 1.01
IRX4P78413 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.35■■□□□ 1.01
IRX4P78413 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
IRX4P78413 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
IRX4P78413 CNN2P6-201ENST00000439038 900 ntBASIC21.35■■□□□ 1.01
IRX4P78413 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms