Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18■□□□□ 0.47
SEC61A1P61619 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18■□□□□ 0.47
SEC61A1P61619 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18■□□□□ 0.47
SEC61A1P61619 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18■□□□□ 0.47
SEC61A1P61619 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18■□□□□ 0.47
SEC61A1P61619 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SEC61A1P61619 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 FEM1AP1-201ENST00000431297 1995 ntBASIC18■□□□□ 0.47
SEC61A1P61619 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18■□□□□ 0.47
SEC61A1P61619 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18■□□□□ 0.47
SEC61A1P61619 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.99■□□□□ 0.47
SEC61A1P61619 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.99■□□□□ 0.47
SEC61A1P61619 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SEC61A1P61619 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.99■□□□□ 0.47
SEC61A1P61619 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
SEC61A1P61619 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 IKBKGP1-201ENST00000612193 1073 ntBASIC17.99■□□□□ 0.47
SEC61A1P61619 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SEC61A1P61619 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SEC61A1P61619 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.99■□□□□ 0.47
SEC61A1P61619 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SEC61A1P61619 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEC61A1P61619 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SEC61A1P61619 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SEC61A1P61619 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SEC61A1P61619 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SEC61A1P61619 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.98■□□□□ 0.47
SEC61A1P61619 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.98■□□□□ 0.47
SEC61A1P61619 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SEC61A1P61619 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SEC61A1P61619 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.98■□□□□ 0.47
SEC61A1P61619 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SEC61A1P61619 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SEC61A1P61619 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.98■□□□□ 0.47
SEC61A1P61619 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
SEC61A1P61619 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.98■□□□□ 0.47
SEC61A1P61619 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEC61A1P61619 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.97■□□□□ 0.47
SEC61A1P61619 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.97■□□□□ 0.47
SEC61A1P61619 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.97■□□□□ 0.47
SEC61A1P61619 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 AC079089.2-201ENST00000531211 1277 ntBASIC17.97■□□□□ 0.47
SEC61A1P61619 NTF6G-201ENST00000591094 616 ntBASIC17.97■□□□□ 0.47
SEC61A1P61619 AC022517.1-201ENST00000592429 346 ntBASIC17.97■□□□□ 0.47
SEC61A1P61619 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.97■□□□□ 0.47
SEC61A1P61619 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.97■□□□□ 0.47
SEC61A1P61619 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.97■□□□□ 0.47
SEC61A1P61619 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.97■□□□□ 0.47
SEC61A1P61619 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEC61A1P61619 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms