Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.77■■□□□ 1.08
CHRNA3P32297 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.77■■□□□ 1.08
CHRNA3P32297 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNA3P32297 KRT18P61-201ENST00000585825 1298 ntBASIC21.77■■□□□ 1.08
CHRNA3P32297 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNA3P32297 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.77■■□□□ 1.08
CHRNA3P32297 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNA3P32297 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNA3P32297 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNA3P32297 AP004607.4-201ENST00000530158 1459 ntBASIC21.77■■□□□ 1.07
CHRNA3P32297 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHRNA3P32297 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHRNA3P32297 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHRNA3P32297 AC079140.4-201ENST00000507448 529 ntBASIC21.76■■□□□ 1.07
CHRNA3P32297 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHRNA3P32297 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRNA3P32297 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHRNA3P32297 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRNA3P32297 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRNA3P32297 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNA3P32297 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CHRNA3P32297 AC073314.1-201ENST00000568729 2216 ntBASIC21.75■■□□□ 1.07
CHRNA3P32297 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 AC004854.2-201ENST00000608450 1441 ntBASIC21.75■■□□□ 1.07
CHRNA3P32297 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CHRNA3P32297 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.75■■□□□ 1.07
CHRNA3P32297 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.75■■□□□ 1.07
CHRNA3P32297 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.75■■□□□ 1.07
CHRNA3P32297 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHRNA3P32297 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHRNA3P32297 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHRNA3P32297 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRNA3P32297 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHRNA3P32297 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CHRNA3P32297 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.74■■□□□ 1.07
CHRNA3P32297 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.74■■□□□ 1.07
CHRNA3P32297 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.74■■□□□ 1.07
CHRNA3P32297 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.74■■□□□ 1.07
CHRNA3P32297 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.74■■□□□ 1.07
CHRNA3P32297 AC092437.1-201ENST00000624794 1048 ntBASIC21.74■■□□□ 1.07
CHRNA3P32297 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA3P32297 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.74■■□□□ 1.07
CHRNA3P32297 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHRNA3P32297 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.73■■□□□ 1.07
CHRNA3P32297 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CHRNA3P32297 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRNA3P32297 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.73■■□□□ 1.07
CHRNA3P32297 AL137784.2-201ENST00000607332 1000 ntBASIC21.73■■□□□ 1.07
CHRNA3P32297 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRNA3P32297 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA3P32297 AL121603.2-201ENST00000557373 2117 ntBASIC21.73■■□□□ 1.07
CHRNA3P32297 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CHRNA3P32297 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.72■■□□□ 1.07
CHRNA3P32297 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRNA3P32297 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA3P32297 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHRNA3P32297 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.72■■□□□ 1.07
CHRNA3P32297 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CHRNA3P32297 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms