Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRAFP15056 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRAFP15056 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRAFP15056 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRAFP15056 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BRAFP15056 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.18■□□□□ 0.98
BRAFP15056 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 AL162430.1-201ENST00000480705 870 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L2-201ENST00000561772 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.18■□□□□ 0.98
BRAFP15056 CCDC92B-201ENST00000575506 885 ntBASIC21.18■□□□□ 0.98
BRAFP15056 TPRG1LP1-201ENST00000598702 760 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L6-201ENST00000626483 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L1-201ENST00000627662 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L8-201ENST00000629013 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L3-201ENST00000630187 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L7-201ENST00000630678 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 DUX4L5-201ENST00000630834 1275 ntBASIC21.18■□□□□ 0.98
BRAFP15056 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BRAFP15056 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.18■□□□□ 0.98
BRAFP15056 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BRAFP15056 BX005040.4-201ENST00000637145 1518 ntBASIC21.18■□□□□ 0.98
BRAFP15056 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRAFP15056 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
BRAFP15056 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BRAFP15056 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
BRAFP15056 TERF1P2-201ENST00000583350 1212 ntBASIC21.17■□□□□ 0.98
BRAFP15056 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 LINC02228-203ENST00000641970 1355 ntBASIC21.17■□□□□ 0.98
BRAFP15056 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
BRAFP15056 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.17■□□□□ 0.98
BRAFP15056 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRAFP15056 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 AFG3L1P-217ENST00000557444 2447 ntBASIC21.16■□□□□ 0.98
BRAFP15056 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 PLK5-205ENST00000642079 1969 ntBASIC21.16■□□□□ 0.98
BRAFP15056 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BRAFP15056 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
BRAFP15056 AC034268.1-201ENST00000441047 882 ntBASIC21.16■□□□□ 0.98
BRAFP15056 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.16■□□□□ 0.98
BRAFP15056 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.16■□□□□ 0.98
BRAFP15056 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.16■□□□□ 0.98
BRAFP15056 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRAFP15056 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.16■□□□□ 0.98
BRAFP15056 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
BRAFP15056 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.15■□□□□ 0.98
BRAFP15056 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.15■□□□□ 0.98
BRAFP15056 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRAFP15056 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BRAFP15056 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BRAFP15056 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRAFP15056 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BRAFP15056 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.14■□□□□ 0.98
BRAFP15056 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.14■□□□□ 0.97
BRAFP15056 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRAFP15056 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.14■□□□□ 0.97
BRAFP15056 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRAFP15056 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.14■□□□□ 0.97
BRAFP15056 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms