Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.08■□□□□ 0.81
PCNAP12004 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.08■□□□□ 0.81
PCNAP12004 AC104187.1-201ENST00000607510 612 ntBASIC20.08■□□□□ 0.81
PCNAP12004 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.08■□□□□ 0.81
PCNAP12004 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCNAP12004 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCNAP12004 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.08■□□□□ 0.8
PCNAP12004 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.08■□□□□ 0.8
PCNAP12004 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNAP12004 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNAP12004 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.07■□□□□ 0.8
PCNAP12004 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCNAP12004 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNAP12004 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.07■□□□□ 0.8
PCNAP12004 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.07■□□□□ 0.8
PCNAP12004 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCNAP12004 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.07■□□□□ 0.8
PCNAP12004 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.07■□□□□ 0.8
PCNAP12004 AC138907.5-202ENST00000569484 235 ntBASIC20.07■□□□□ 0.8
PCNAP12004 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNAP12004 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCNAP12004 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
PCNAP12004 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.06■□□□□ 0.8
PCNAP12004 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
PCNAP12004 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.06■□□□□ 0.8
PCNAP12004 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCNAP12004 POU5F1P4-201ENST00000413175 1085 ntBASIC20.06■□□□□ 0.8
PCNAP12004 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.06■□□□□ 0.8
PCNAP12004 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCNAP12004 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.05■□□□□ 0.8
PCNAP12004 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCNAP12004 LINC01521-201ENST00000504184 1943 ntBASIC20.05■□□□□ 0.8
PCNAP12004 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCNAP12004 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 AC004854.2-201ENST00000608450 1441 ntBASIC20.04■□□□□ 0.8
PCNAP12004 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 AC010141.2-201ENST00000452426 721 ntBASIC20.04■□□□□ 0.8
PCNAP12004 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L2-201ENST00000561772 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
PCNAP12004 AC120498.10-201ENST00000621827 505 ntBASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L6-201ENST00000626483 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L1-201ENST00000627662 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L8-201ENST00000629013 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L3-201ENST00000630187 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L7-201ENST00000630678 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 DUX4L5-201ENST00000630834 1275 ntBASIC20.04■□□□□ 0.8
PCNAP12004 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.04■□□□□ 0.8
PCNAP12004 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNAP12004 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNAP12004 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.03■□□□□ 0.8
PCNAP12004 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.03■□□□□ 0.8
PCNAP12004 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PCNAP12004 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.03■□□□□ 0.8
PCNAP12004 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.03■□□□□ 0.8
PCNAP12004 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
PCNAP12004 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.03■□□□□ 0.8
PCNAP12004 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.03■□□□□ 0.8
PCNAP12004 AP001160.3-201ENST00000601484 763 ntBASIC20.03■□□□□ 0.8
PCNAP12004 AC092667.1-201ENST00000434301 2586 ntBASIC20.03■□□□□ 0.8
PCNAP12004 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.03■□□□□ 0.8
PCNAP12004 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.03■□□□□ 0.8
PCNAP12004 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNAP12004 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms