Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SIX6O95475 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.3■□□□□ 0.36
SIX6O95475 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.3■□□□□ 0.36
SIX6O95475 AL031602.1-201ENST00000633169 911 ntBASIC17.3■□□□□ 0.36
SIX6O95475 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 AL158211.5-201ENST00000623583 2518 ntBASIC17.3■□□□□ 0.36
SIX6O95475 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.3■□□□□ 0.36
SIX6O95475 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.3■□□□□ 0.36
SIX6O95475 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIX6O95475 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SIX6O95475 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SIX6O95475 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SIX6O95475 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SIX6O95475 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.29■□□□□ 0.36
SIX6O95475 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SIX6O95475 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.29■□□□□ 0.36
SIX6O95475 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX6O95475 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIX6O95475 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SIX6O95475 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX6O95475 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.28■□□□□ 0.36
SIX6O95475 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIX6O95475 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIX6O95475 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SIX6O95475 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 RNF126P1-201ENST00000567452 1320 ntBASIC17.27■□□□□ 0.36
SIX6O95475 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.27■□□□□ 0.36
SIX6O95475 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SIX6O95475 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.27■□□□□ 0.36
SIX6O95475 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.27■□□□□ 0.36
SIX6O95475 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.27■□□□□ 0.36
SIX6O95475 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX6O95475 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SIX6O95475 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SIX6O95475 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
SIX6O95475 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.27■□□□□ 0.35
SIX6O95475 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX6O95475 FP700111.2-201ENST00000619190 1892 ntBASIC17.27■□□□□ 0.35
SIX6O95475 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX6O95475 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SIX6O95475 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX6O95475 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.26■□□□□ 0.35
SIX6O95475 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX6O95475 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.26■□□□□ 0.35
SIX6O95475 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX6O95475 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 NEFHP1-201ENST00000412845 2629 ntBASIC17.26■□□□□ 0.35
SIX6O95475 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX6O95475 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX6O95475 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.25■□□□□ 0.35
SIX6O95475 AC009102.2-201ENST00000606772 1639 ntBASIC17.25■□□□□ 0.35
SIX6O95475 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX6O95475 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIX6O95475 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIX6O95475 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms