Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNSO60931 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.4■□□□□ 0.7
CTNSO60931 AC007322.3-201ENST00000426526 701 ntBASIC19.4■□□□□ 0.7
CTNSO60931 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.4■□□□□ 0.7
CTNSO60931 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.4■□□□□ 0.7
CTNSO60931 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.4■□□□□ 0.7
CTNSO60931 AC011484.1-201ENST00000377652 1995 ntBASIC19.4■□□□□ 0.7
CTNSO60931 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CTNSO60931 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNSO60931 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTNSO60931 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNSO60931 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
CTNSO60931 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
CTNSO60931 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 CROCCP5-201ENST00000436658 830 ntBASIC19.39■□□□□ 0.69
CTNSO60931 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.39■□□□□ 0.69
CTNSO60931 AC090192.1-201ENST00000517740 490 ntBASIC19.39■□□□□ 0.69
CTNSO60931 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNSO60931 FAM21FP-204ENST00000608637 956 ntBASIC19.39■□□□□ 0.69
CTNSO60931 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 AC121338.2-201ENST00000622535 1744 ntBASIC19.39■□□□□ 0.69
CTNSO60931 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNSO60931 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNSO60931 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTNSO60931 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNSO60931 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNSO60931 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNSO60931 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTNSO60931 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNSO60931 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNSO60931 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNSO60931 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNSO60931 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTNSO60931 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNSO60931 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNSO60931 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTNSO60931 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTNSO60931 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTNSO60931 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CTNSO60931 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNSO60931 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.37■□□□□ 0.69
CTNSO60931 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 AC069236.1-201ENST00000604339 616 ntBASIC19.37■□□□□ 0.69
CTNSO60931 AC016405.3-201ENST00000607710 860 ntBASIC19.37■□□□□ 0.69
CTNSO60931 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNSO60931 OR10C1-204ENST00000622521 1039 ntBASIC19.37■□□□□ 0.69
CTNSO60931 AC008694.1-202ENST00000636953 945 ntBASIC19.37■□□□□ 0.69
CTNSO60931 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNSO60931 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.37■□□□□ 0.69
CTNSO60931 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTNSO60931 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNSO60931 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTNSO60931 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 CYP2T1P-201ENST00000432607 1285 ntBASIC19.36■□□□□ 0.69
CTNSO60931 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNSO60931 AC006970.2-201ENST00000450065 779 ntBASIC19.36■□□□□ 0.69
CTNSO60931 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.36■□□□□ 0.69
CTNSO60931 RARRES2P4-201ENST00000514074 484 ntBASIC19.36■□□□□ 0.69
CTNSO60931 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNSO60931 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CTNSO60931 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNSO60931 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms