Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSSCA1O60232 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.83■□□□□ 0.29
SSSCA1O60232 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSSCA1O60232 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.83■□□□□ 0.28
SSSCA1O60232 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.83■□□□□ 0.28
SSSCA1O60232 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 FP700111.2-201ENST00000619190 1892 ntBASIC16.83■□□□□ 0.28
SSSCA1O60232 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSSCA1O60232 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SSSCA1O60232 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.82■□□□□ 0.28
SSSCA1O60232 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SSSCA1O60232 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSSCA1O60232 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
SSSCA1O60232 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.81■□□□□ 0.28
SSSCA1O60232 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SSSCA1O60232 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SSSCA1O60232 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.81■□□□□ 0.28
SSSCA1O60232 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 AC239859.2-201ENST00000444165 318 ntBASIC16.81■□□□□ 0.28
SSSCA1O60232 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.81■□□□□ 0.28
SSSCA1O60232 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 MIR6724-1-201ENST00000616420 92 ntBASIC16.81■□□□□ 0.28
SSSCA1O60232 MIR6724-2-201ENST00000616483 92 ntBASIC16.81■□□□□ 0.28
SSSCA1O60232 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 MIR6724-4-201ENST00000617390 92 ntBASIC16.81■□□□□ 0.28
SSSCA1O60232 MIR6724-3-201ENST00000622482 92 ntBASIC16.81■□□□□ 0.28
SSSCA1O60232 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SSSCA1O60232 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
SSSCA1O60232 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSSCA1O60232 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
SSSCA1O60232 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSSCA1O60232 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.8■□□□□ 0.28
SSSCA1O60232 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSSCA1O60232 AC099778.1-201ENST00000568593 1911 ntBASIC16.8■□□□□ 0.28
SSSCA1O60232 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 AL162377.1-201ENST00000618844 1793 ntBASIC16.8■□□□□ 0.28
SSSCA1O60232 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.8■□□□□ 0.28
SSSCA1O60232 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.8■□□□□ 0.28
SSSCA1O60232 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.8■□□□□ 0.28
SSSCA1O60232 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.8■□□□□ 0.28
SSSCA1O60232 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSSCA1O60232 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.8■□□□□ 0.28
SSSCA1O60232 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms